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bovee / entab

* -> TSV
MIT License
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Support Thermo/Finnegan RAW format #2

Closed bovee closed 2 years ago

bovee commented 3 years ago

This is a fairly common format for mass spec data so it would be useful to support it.

I think all the other open source implementations are kind-of-dated and interlinked? https://github.com/prvst/unfinnigan https://github.com/draperjames/unfinnigan

bovee commented 2 years ago

There are some CC0-licensed files here to possibly use as test-cases (kind of big though): ftp://massive.ucsd.edu/MSV000086542/raw/

bovee commented 2 years ago

Added in f0ffd1d6a4a8aacaa3ff93b2379d84b7c71b8c56. Tested on versions between 57, 64, 66. Coeffs and Metadata parsing appears to work on Version 50, but the data block is entirely u16s (?) so I think it probably needs additional information from Metadata to parse properly.