bowang-lab / MedSAM

Segment Anything in Medical Images
https://www.nature.com/articles/s41467-024-44824-z
Apache License 2.0
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Can we do segmentation over whole 3d CT dataset without any ground truth? #49

Closed aaekay closed 1 year ago

JunMa11 commented 1 year ago

Hi @aaekay ,

It depends on what you want to segment. SAM is a promptable segmentation method. Thus, you need to feed a prompt to the model to specify the organ that you want to segment.

If you are looking for a pre-trained model that can segment the main organ in CT scans. Totalsegmentator would be a better choice.

https://github.com/wasserth/TotalSegmentator