Single edn reads preprocessing

roman-spanek commented 4 years ago

Dear Jeff, I was wondering if you might be interested in a script that prepares input files for paprica from single end reads (IonTorrent). I would be happy to share.

bowmanjeffs commented 4 years ago

Certainly! The best thing to do is fork the repository, then add your script to the "utilities" directory and make any necessary changes to the documentation, then push the changes to me. Alternatively you can send it to me directly, but pushing is better.

Cheers, Jeff

=============================

Jeff S. Bowman

Assistant Professor

Integrative Oceanography Division

Scripps Institution of Oceanography

www.polarmicrobes.org

------ Original Message ------ From: "roman-spanek" notifications@github.com To: "bowmanjeffs/paprica" paprica@noreply.github.com Cc: "Subscribed" subscribed@noreply.github.com Sent: 11/11/2019 12:45:39 AM Subject: [bowmanjeffs/paprica] Single edn reads preprocessing (#70)

Dear Jeff, I was wondering if you might be interested in a script that prepares input files for paprica from single end reads (IonTorrent). I would be happy to share.

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roman-spanek commented 4 years ago

Great, I’ll comment the script a little bit and push it into the repo.

Cheers,

Roman

From: Jeff Bowman [mailto:notifications@github.com] Sent: Monday, November 11, 2019 4:24 PM To: bowmanjeffs/paprica paprica@noreply.github.com Cc: roman-spanek roman.spanek@tul.cz; Author author@noreply.github.com Subject: Re: [bowmanjeffs/paprica] Single edn reads preprocessing (#70)

Certainly! The best thing to do is fork the repository, then add your script to the "utilities" directory and make any necessary changes to the documentation, then push the changes to me. Alternatively you can send it to me directly, but pushing is better.

Cheers, Jeff

=============================

Jeff S. Bowman

Assistant Professor

Integrative Oceanography Division

Scripps Institution of Oceanography

www.polarmicrobes.org http://www.polarmicrobes.org

------ Original Message ------ From: "roman-spanek" <notifications@github.com mailto:notifications@github.com > To: "bowmanjeffs/paprica" <paprica@noreply.github.com mailto:paprica@noreply.github.com > Cc: "Subscribed" <subscribed@noreply.github.com mailto:subscribed@noreply.github.com > Sent: 11/11/2019 12:45:39 AM Subject: [bowmanjeffs/paprica] Single edn reads preprocessing (#70)

Dear Jeff, I was wondering if you might be interested in a script that prepares input files for paprica from single end reads (IonTorrent). I would be happy to share.

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bowmanjeffs / paprica

Single edn reads preprocessing #70