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boxiangliu / locuscomparer

LocusCompareR is a R package with visualization tools for comparing two genetic association datasets.
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SNPs of locuscomparer are not the same as colocalization SNPs #24

Open ghost opened 1 year ago

ghost commented 1 year ago

Hi, I am using locuscomparer to visualize colocalization results, but the SNPs I draw with the R package are not the same as the colocalized SNPs. Could you help me with this? Thank you!

NancyLSH commented 8 months ago

Hi, I am with the same problem, are you solve with it?

guohuangda commented 5 months ago

I have the same problem, the colocalized SNP (using 'coloc' package) was different from the plot one. Could u help me with this?

guohuangda commented 5 months ago

Hi, I am with the same problem, are you solve with it? I have the same problem, the colocalized SNP (using 'coloc' package) was different from the plot one. Could u help me with this?