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boxiangliu / locuscomparer

LocusCompareR is a R package with visualization tools for comparing two genetic association datasets.
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Compilation failure: no DLL was created #3

Closed jccensin closed 5 years ago

jccensin commented 5 years ago

Good morning,

I would really like to use LocusCompareR as it seems like a great pacakges, but I'm having trouble installing LocusComparer on R 3.5.3 and Windows 10. I can load devtools properly, but when doing devtools::install_github("boxiangliu/locuscomparer") I get the following error message after the dependencies have been installed:

\* installing *source* package 'locuscomparer' ... ** libs no DLL was created ERROR: compilation failed for package 'locuscomparer' \* removing 'C:/Users/Jenny/Documents/R/win-library/3.5/locuscomparer' In R CMD INSTALL Error in i.p(...) : (converted from warning) installation of package ‘C:/Users/Jenny/AppData/Local/Temp/RtmpWkwypc/file18646fe17717/locuscomparer_1.0.0.tar.gz’ had non-zero exit status

I've tried other versions of R (3.5.1, 3.4.3), reinstalling Rtools (trying both version 34 and 35), using another computer (same problem), only installing the 32 bit or 64 bit version of R, and I keep getting similar compilation issues. Other packages work fine. I would really appreciate any help in getting it to work.

Many thanks!

/Jenny

boxiangliu commented 5 years ago

Thank you Jenny for reaching out.

The error message from R console is not immediate clear, so to be honest, I am not sure what is causing the problem.

Could you try the following:

1) install rlang (>=0.3.1) 2) install DBI (>=0.10.17) 3) install RMySQL (>=1.0.0)

And then try installing locuscomparer again?

boxiangliu commented 5 years ago

Hello Jenny,

I pushed a fix. Could you reinstall and see if the issue persists?

jccensin commented 5 years ago

Hi! I'm very sorry for the late reply, I've been away - but the fix worked as a charm! Thank you very much, look forward to using LocusComparer!