Missing echo statement in mbio_part1

[mcuaya1]

https://github.com/bpeacock44/targeted_microbiome_via_blast/blob/4a8b36e2ce29784bb77630f2b8639de6815e65b0/pipeline_scripts/mbio_part1.sh#L83

This line here is missing an echo statement. This currently causes the program to crash on part 1.

[bpeacock44]

Hi Mario,

Thank you - sorry about that! I'm going to test everything again right now.

-Beth

On Tue, Jun 25, 2024 at 10:26 PM Mario Cuaya @.***> wrote:

Assigned #9 https://github.com/bpeacock44/targeted_microbiome_via_blast/issues/9 to @bpeacock44 https://github.com/bpeacock44.

— Reply to this email directly, view it on GitHub https://github.com/bpeacock44/targeted_microbiome_via_blast/issues/9#event-13292039270, or unsubscribe https://github.com/notifications/unsubscribe-auth/AHWZYN33SFTOVUKZ5DBHJBDZJJGGZAVCNFSM6AAAAABJ5D2QBOVHI2DSMVQWIX3LMV45UABCJFZXG5LFIV3GK3TUJZXXI2LGNFRWC5DJN5XDWMJTGI4TEMBTHEZDOMA . You are receiving this because you were assigned.Message ID: <bpeacock44/targeted_microbiome_via_blast/issue/9/issue_event/13292039270@ github.com>

[bpeacock44]

Fixed!

On Wed, Jun 26, 2024 at 9:54 AM Beth Peacock @.***> wrote:

Hi Mario,

Thank you - sorry about that! I'm going to test everything again right now.

-Beth

On Tue, Jun 25, 2024 at 10:26 PM Mario Cuaya @.***> wrote:

Assigned #9 https://github.com/bpeacock44/targeted_microbiome_via_blast/issues/9 to @bpeacock44 https://github.com/bpeacock44.

— Reply to this email directly, view it on GitHub https://github.com/bpeacock44/targeted_microbiome_via_blast/issues/9#event-13292039270, or unsubscribe https://github.com/notifications/unsubscribe-auth/AHWZYN33SFTOVUKZ5DBHJBDZJJGGZAVCNFSM6AAAAABJ5D2QBOVHI2DSMVQWIX3LMV45UABCJFZXG5LFIV3GK3TUJZXXI2LGNFRWC5DJN5XDWMJTGI4TEMBTHEZDOMA . You are receiving this because you were assigned.Message ID: <bpeacock44/targeted_microbiome_via_blast/issue/9/issue_event/13292039270 @github.com>

[mcuaya1]

Okay, sounds! No worries at all. I'm processing data through the pipeline again so if I run into any issues, I'll open another issue on here so it can be addressed. We can close this issue currently if it has been addressed.

[bpeacock44]

Thank you - as mentioned before I am not used to collaborating over github so I apologize again for the inconvenience! I should've had a branch going instead of directly changing the main.

On Wed, Jun 26, 2024 at 10:37 AM Mario Cuaya @.***> wrote:

Okay, sounds! No worries at all. I'm processing data through the pipeline again so if I run into any issues, I'll open another issue on here so it can be addressed. We can close this issue currently if it has been addressed.

— Reply to this email directly, view it on GitHub https://github.com/bpeacock44/targeted_microbiome_via_blast/issues/9#issuecomment-2192276897, or unsubscribe https://github.com/notifications/unsubscribe-auth/AHWZYNZ7DXBG2SI5PJERDW3ZJL357AVCNFSM6AAAAABJ5D2QBOVHI2DSMVQWIX3LMV43OSLTON2WKQ3PNVWWK3TUHMZDCOJSGI3TMOBZG4 . You are receiving this because you were mentioned.Message ID: @.***>

[mcuaya1]

No problem, I understand completely. I'll go ahead and close this issue in a bit as it has been resolved, if you would like to continue using this github feature then please let me know or we can continue communicating issues via email, whatever works best for you.

[bpeacock44]

Oh, no, this is great! Then we can indicate areas with problems/etc. I just need to get my head in the github game. Thank you Mario!

[mcuaya1]

Of course, if you have any questions on github in general or collaborating in github please feel free to reach out. I'll go ahead and close the issue now