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bpt26 / usher_wiki

docs holder for usher wiki
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matutils summary random seed problem? Different results with the same command. #5

Open majagarbulinska opened 2 years ago

majagarbulinska commented 2 years ago

Hi! Thank you very much for the package!

matUtils summary -t test1.tsv -i public-latest.all.masked.pb -g ncbiGenes_.gtf -f NC_045512v2.fa.gz matUtils summary -t test2.tsv -i public-latest.all.masked.pb -g ncbiGenes_.gtf -f NC_045512v2.fa.gz

diff test2.tsv test1.tsv | grep "^>" | wc -l gives a number >0

Exactly the same command with exactly the same files give us different results. Would there be a possibility of including a random seed parameter to get the same results every time we run the same command for reproducible results?

Thank you!