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Incorrect DOIs stated in Europe PMC and PubMed #8

Open Daniel-Mietchen opened 6 years ago

Daniel-Mietchen commented 6 years ago

The following Wikidata query lists DOIs in Wikidata that do not start with the obligatory "10":

SELECT ?q ?doi {
  ?q wdt:P356 ?doi .
  FILTER(!REGEX(?doi, "^(10)")).
  }
limit 200

The first 200 results were

Q47318649   234
Q47318639   235
Q33352073   004
Q47969590   210
Q47713364   217
Q40151820   219
Q48217608   220
Q40151814   230
Q39736360   2324
Q47673028   2397
Q39475445   2401
Q47347051   2505
Q39297625   2600
Q48166698   123
Q47847055   205
Q47969601   208
Q47713398   212
Q47713387   215
Q39836609   2289
Q40789646   2290
Q39836596   2300
Q47840049   232
Q40735977   2321
Q47788024   2333
Q39647519   2350
Q47719557   2378
Q50143665   2423
Q39349039   2426
Q47677059   2430
Q48001880   2491
Q48260062   250
Q38838466   2572
Q38793171   2597
Q47327050   2630
Q47294086   2653
Q47325832   2654
Q38619587   2657
Q50064947   2715
Q47606227   2745
Q49557744   2775
Q50263045   284
Q41926146   288
Q40789640   2296
Q39647531   2342
Q38880141   2348
Q40677212   2361
Q47719568   2377
Q47825322   240
Q47825295   244
Q39240349   2577
Q47565612   2579
Q40291119   259
Q38793180   2594
Q36368505   2595
Q38793167   2598
Q38733609   2616
Q47270823   2675
Q47622511   268
Q41919930   2703
Q47247189   2708
Q50090688   2714
Q47602869   2726
Q46278298   2727
Q47219026   2744
Q39997330   009
Q48217598   227
Q39836627   2284
Q39836621   2286
Q36029533   2330
Q36063633   2340
Q40677254   2344
Q38880146   2355
Q33468286   2359
Q40291125   236
Q47402855   2381
Q39508767   2383
Q38931477   2403
Q39349032   2427
Q39349002   2440
Q39044306   2494
Q47347064   2499
Q47829147   2514
Q38908648   2517
Q36307855   2518
Q38908645   2520
Q40065326   2524
Q38908641   2525
Q38838469   2570
Q40064891   258
Q40217819   2606
Q40178549   2610
Q47327029   2633
Q47327018   2634
Q47294106   2651
Q40039031   2682
Q50114750   2687
Q47669982   2702
Q47849145   2709
Q47748276   2719
Q47748249   2723
Q50064994   2735
Q47219015   2747
Q50045734   2760
Q47622486   277
Q47696746   2770
Q40151828   216
Q48591145   222
Q40706309   2293
Q40789634   2305
Q40789628   2306
Q47820378   2307
Q47739888   2311
Q40659840   2334
Q40677228   2353
Q39293740   2354
Q39647511   2356
Q39508784   2372
Q39508775   2374
Q40582857   2385
Q39475460   2396
Q40615945   2400
Q48020677   2412
Q39349023   2429
Q39349011   2432
Q38965009   2434
Q48260069   249
Q47594782   2493
Q39044301   2500
Q40294651   2527
Q47395087   2571
Q47307523   2574
Q33168624   2599
Q48636149   2611
Q38733613   2614
Q41929635   2625
Q44432359   2629
Q38619590   2650
Q40089569   2664
Q47247212   2696
Q48576647   2700
Q47423734   2716
Q50064990   2734
Q50045745   2758
Q47226427   2765
Q49557713   2779
Q40050473   224
Q40706302   2294
Q40706296   2295
Q40368107   2303
Q47788069   2315
Q38844285   2335
Q40632928   2345
Q36063636   2349
Q48027403   2369
Q39508778   2373
Q47719545   2380
Q36107668   2406
Q40064900   241
Q38931482   2415
Q39349017   2431
Q40087310   2439
Q39348995   2442
Q47594770   2495
Q47594760   2498
Q33440231   251
Q47246389   261
Q41926160   264
Q38687886   2642
Q40130538   2643
Q40089575   2661
Q47990108   2673
Q50114771   2684
Q50090668   2707
Q50090683   2712
Q50064960   2729
Q50064982   2733
Q50045786   2742
Q47408324   2746
Q47606213   2748
Q50045756   2756
Q50045740   2759
Q47204535   2764
Q46252224   2766
Q49557824   2767
Q47204520   2768
Q47204511   2769
Q49557763   2773
Q49557690   2781
Q47756241   281
Q39736366   2322
Q39647525   2343
Q40582874   2375
Q47326971   2637
Q40143073   2638
Q47644877   2669
Q47990118   2672
Q40039037   2681
Q50090639   2692
Q47237543   2717
Q42517208   2737
Daniel-Mietchen commented 6 years ago

Checking the first one of these reveals that indeed https://www.wikidata.org/w/index.php?title=Q47318649&oldid=619980226#P356 has a statement with a DOI of "234", which can be traced back to both

Daniel-Mietchen commented 6 years ago

For this case, a Crossref search does not yield any immediate results, so not sure where the problem may come from.

Trying another one: https://www.wikidata.org/w/index.php?title=Q47237543&oldid=619205622#P356 has a DOI of "2717", which is stated at both

In this case, a Crossref search yields a DOI of 10.1016/j.joca.2012.02.324, which points to a chain of redirects currently ending at http://www.oarsijournal.com/article/S1063-4584(12)00396-2/fulltext .

Daniel-Mietchen commented 6 years ago

I am focusing right now on removing those erroneous statements from Wikidata. Have done the first batch with the 200 listed above (sample edit).

Daniel-Mietchen commented 6 years ago

The next batch is running (sample edit):

Q47318649   234
Q47622493   275
Q39475431   2404
Q47825282   248
Q40293032   2512
Q36307852   2516
Q38793196   2590
Q38733604   2617
Q47296869   2678
Q50114728   2690
Q47622499   271
Q47237518   2720
Q50064952   2724
Q50065000   2736
Q50045792   2740
Q47581296   2754
Q47616130   2755
Q47226404   2774
Q49557679   2782
Q47713326   287
Q48580830   2370
Q40570392   2422
Q38733618   2613
Q47990127   2671
Q49557873   2762
Q50120903   15237
Q38878556   2292
Q39736348   2327
Q40632882   2357
Q38922655   2382
Q47673009   2416
Q47677084   2428
Q39153127   2641
Q38619588   2655
Q47736218   2656
Q50064976   2732
Q50045794   2739
Q48544958   2743
Q47353601   2751
Q41987594   2699
Q50045763   2753
Q47696762   2763
Q39836601   2297
Q40109040   2310
Q47425515   2316
Q36098487   2386
Q47400163   2410
Q38793199   2589
Q47722197   2624
Q38660792   2632
Q47665127   2658
Q50114800   2676
Q50114758   2686
Q47247223   2694
Q50090649   2698
Q47237530   2718
Q42516106   276
Q47204498   2776
Q40706287   2301
Q40736000   2314
Q40632908   2346
Q47719531   2388
Q39475424   2407
Q39349052   2424
Q48032288   2626
Q47270845   2670
Q47990068   2679
Q47571730   2778
Q40615939   2402
Q33438056   2502
Q47418501   2511
Q40143067   2640
Q46307524   2685
Q40735987   2319
Q50236451   2360
Q40629669   2379
Q39475418   2408
Q38793185   2593
Q47867277   2615
Q42510833   2619
Q50090645   2697
Q47601076   2705
Q50045773   2750
Q50045768   2752
Q42623735   14430
Q39836614   2287
Q38844279   2317
Q47829134   2515
Q47247232   2693
Q47243214   2713
Q47620259   2728
Q50045751   2757
Q49557701   2780
Q41926154   279
Q40099248   2364
Q40615954   2398
Q47326982   2636
Q47294095   2652
Q47825307   2695
Q50064957   2725
Q43827428   005
Q47204504   2771
Q39736373   2320
Q47757765   2347
Q39349045   2425
Q47867247   2622
Q50114784   2680
Q41987591   2704
Q50064971   2731
Q50045775   2749
Q47712460   2352
Q40582887   2371
Q40615962   2395
Q40615928   2414
Q47705190   2639
Q50090678   2711
Q47788094   2312
Q39736353   2325
Q39475452   2399
Q47246545   2506
Q50090655   2701
Q47219034   2741
Q47788040   2326
Q38838463   2575
Q49557775   2772
Q39647503   2362
Q39044311   2492
Q44339130   2530
Q47400452   2389
Q38946283   2433
Q38793192   2591
Q38793176   2596
Q47696342   2683
Q50090662   2706
Q47237486   2722
Q47808580   2332
Q39240341   2569
Q47640967   2677
Q50114734   2689
Q50064965   2730
Q47994072   2436
Q40582868   2376
Q39480271   006
Q50146653   20651
Q47237497   2721
Q39691739   72579
Q47270833   2674
Q47439210   2285
Q45911568   29683
Q39508789   2368
Q40098334   22846
Q40005702   45968
Q30387748   IJIV7I1A5
Q30379840   SMW-12737
Q30393146   010135/AIM.0022
Q30411201   012151/AIM.0015
Q30418574   IJIV9I2A2
Q30833544   DOI: 10.4415/ANN_14_02_04
Q30947237   1396674/DOT.2009.45.9.1418185
Q31042376   0161902/AIM.009
Q33316768   2008/03/SMW-11717
Q33404058   0121511/AIM.0016
Q33400846   012155/AIM.0011
Q33399553   02.2012/JCPSP.101104
Q33415425   04.2014/JCPSP.340344
Q33408869   07.2013/JCPSP.463467
Q33397189   09.2011/JCPSP.564566
Q33419396   11.2014/JCPSP.S281S283
Q33427615   11.2015/JCPSP.841842
Q33636173   05.2010/JCPSP.307309
Q33611800   DOI: 10.4415/ANN_10_02_07
Q34013845   09.2008/JCPSP.565568
Q34145318   DOI: 10.1097/NUR.0B013E3181ECDC32
Q34158254   JSC.2010.5.1.23
Q34196229   DOI: CVJ-21.023
Q34511182   MAGYONKOL.2012.56.4.230
Q34680776   0172002/AIM.004
Q34647036   04.2013/JCPSP.261264
Q35323368   0141710/AIM.004
Q35643743   CLICA1506859870
Q35643751   CLICA1506877882
Q35688834   DOI:10.11817/J.ISSN.1672-7347.2015.06.008
Q35776801   09.2015/JCPSP.698699
Q37093890   08112/AIM.0012
Q37091854   2008/05/SMW-11958
Q37091857   2008/05/SMW-11964
Q37091860   2008/07/SMW-12045
Q37152946   01.2008/JCPSP.5863
Q37145944   2008/15/SMW-12180
Q37202747   08114/AIM.0016
Q37202666   2008/25/SMW-12231
Q37226592   2008/29/SMW-12311
Q37340247   07.04/IJAAI.195202
Q37366630   SMW-12151
Q37373468   SMW-12246
Q37471582   SMW-12284
Q37635771   1396674/DOT.2009.45.8.1396674
Q37643474   1396674/DOT.2009.45.9.1416421
Q37662416   SMW-12696
Q37666877   SMW-12765
Q37805465   010136/AIM.0017
Q37789577   DOI: 10.4415/ANN_10_03_02
Q37982311   JSC.2010.5.4.155
Q37982315   JSC.2010.5.4.187
Q38020904   012157/AIM.007
Q38000610   04.2012/JCPSP.240245
Q38032388   08.2012/JCPSP.529530
Q37997878   DOI: 10.4415/ANN_12_01_17
Q38038204   012159/AIM.0014
Q38038203   012159/AIM.004
Q38070205   013161/AIM.007
Q38083748   013163/AIM.0011
Q38058174   DOI: 10.3113/FAI.2012.0964
Q38068057   DOI: 10.4415/ANN_12_04_04
Q38068059   DOI: 10.4415/ANN_12_04_06
Q38068064   DOI: 10.4415/ANN_12_04_12
Q38045863   DOI:10.2223/JPED.2218
Q38103888   013165/AIM.0010
Q38103887   013165/AIM.005
Q38131853   013169/AIM.0012
Q38093704   DOI: 10.4415/ANN_13_01_12
Q38101812   JSC.2012.7.3.155
Q38160332   JSC.2013.7.4.229
Q38195349   0141703/AIM.005
Q38195350   0141703/AIM.006
Q38194718   03.2014/JCPSP.182185
Q38201949   JSC.2014.8.2.115
Q38201956   JSC.2014.8.3/4.151
Q38252358   08.2014/JCPSP.676684
Q38213576   110.1097/QAD.0000000000000230
Q38227884   doi:10.1142/S0129065789000499
Q38243379   JSC.2014.9.1.1
Q38243388   JSC.2014.9.2.117
Q38243341   JSC.2014.9.3.199
Q38314340   0.1016/0378-1119(93)90373-B
Q38264572   0141711/AIM.009
Q38284115   0141712/AIM.007
Q38325586   01.2015/JCPSP.6067
Q38341638   015182/AIM.0013
Q38385477   DOI:10.11817/J.ISSN.1672-7347.2015.10.007
Q38417197   05.2014/JCPSP.S84S85
Q38496284   011141/AIM.004
Q38496110   03.2009/JCPSP.186188
Q38544815   0151807/AIM.004
Q38534960   06.2015/JCPSP.443448
Q38600886   0151810/AIM.007
Q38626496   SMW.2017.14481
Q38684769   SMW.2017.14444
Q38718318   IJIV14I2A5
Q38738900   NO_DOI/1496776443087
Q38743576   IJIV13I3A3
Q47567044   NO_DOI
Q38794884   SMW.2017.14433
Q38825275   JSC.2015.10.4.287
Q38831088   SMW.2017.14422
Q38862973   0161906/AIM.0012
Q38863257   0161909/AIM.005
Q38865083   05.2012/JCPSP.320322
Q38886400   0161904/AIM.003
Q38952282   IJIV11I3A3
Q38965085   IJIV13I3A1
Q38971858   012.01/IJAAI.2936
Q39005170   014174/AIM.0010
Q39005803   0172001/AIM.003
Q39005801   0172001/AIM.005
Q38981498   07.2015/JCPSP.482485
Q38971927   DOI 10.2310/7290.2014.00022
Q39012640   SMW.2016.14376
Q39012644   SMW.2016.14381
Q39012635   SMW.2016.14394
Q39027784   02.2014/JCPSP.9196
Q39044520   04.2015/JCPSP.S14S16
Q39038779   IJIV10I4A7
Q39133240   IJIV10I2A5
Q39155451   07.2014/JCPSP.477480
Q39203271   CLICA
Q39220687   IJIV9I4A1
Q39268793   09.2014/JCPSP.670675
Q39343897   DOI: 10.4415/ANN_13_03_05
Q39348702   IJIV13I3A7
Q39378100   IJIV9I1A1
Q39470655   0161908/AIM.006
Q39533699   010.02/IJAAI.9199
Q39643023   0161907/AIM.004
Q39643017   0161907/AIM.006
Q39655540   02.2012/JCPSP.105107
Q39660916   09.2010/JCPSP.618619
Q39691976   011146/AIM.006
Q39734688   07.2011/JCPSP.360361
Q39777830   010.01/IJAAI.3540
Q39798245   011141/AIM.009
Q39836315   08112/AIM.0017
Q39817044   11.2010/JCPSP.763765
Q39840476   2008/11/SMW-12077
Q39918708   01.2010/JCPSP.6870
Q39866623   0161904/AIM.005
Q39882837   04.2010/JCPSP.262265
Q39877997   IJIV6I1A6
Q39908330   SMW-12805
Q39958893   11.2010/JCPSP.753756
Q39958897   11.2010/JCPSP.760762
Q39938582   DOI: 10.4415/ANN_10_02_04
Q39951320   IJIV3I3A4
Q39927884   SMW-12756
Q39977333   04.2011/JCPSP.223226
Q40030413   0161902/AIM.006
Q39997576   02.2016/JCPSP.108112
Q39997558   02.2016/JCPSP.130133
Q40029413   04.2012/JCPSP.230234
Q40007113   11.2011/JCPSP.676679
Q40029991   DOI:10.2223/JPED.2173
Q40069943   09.04/IJAAI.207217
Q40086381   01.2016/JCPSP.2730
Q40116279   0161903/AIM.0013
Q40114073   03.2016/JCPSP.187190
Q40111053   05.2013/JCPSP.314318
Q40116806   SMW.2017.14469
Q40157754   04.2015/JCPSP.S8S9
Q40154644   05.2015/JCPSP.376377
Q40161598   IJIV12I4A8
Q40127870   SMW.2017.14467
Q40165183   0141701/AIM.003
Q40172731   0161901/AIM.004
Q40172725   0161901/AIM.006
Q40183527   03.2014/JCPSP.S55S56
Q40184419   12.2015/JCPSP.878881
Q40219024   02.2014/JCPSP.141142
Q40209577   07.2014/JCPSP.503507
Q40230138   11.2013/JCPSP.826827
Q40241014   0172004/AIM.006
Q40268406   11.2012/JCPSP.737739
Q40244751   12.2014/JCPSP.931934
Q40274197   IJIV14I1A8
Q40287017   015186/AIM.0014
Q40291017   04.2012/JCPSP.252254
Q40312210   09.2011/JCPSP.539541
Q40316321   CLICA110812011208
Q40283391   SMW.2017.14407
Q40331283   11.2015/JCPSP.811814
Q40402308   0161912/AIM.0011
Q40368629   0172001/AIM.0010
Q40361345   04.2010/JCPSP.258261
Q40382544   08.02/IJAAI.117119
Q40383204   08.2009/JCPSP.487491
Q40383199   08.2009/JCPSP.518519
Q40383193   08.2009/JCPSP.531533
Q40380803   09.2009/JCPSP.591594
Q40407744   CLICA17013943
Q40535678   09.2015/JCPSP.640643
Q40609594   08.2015/JCPSP.560563
Q40609586   08.2015/JCPSP.573578
Q40680979   CLICA160710031008
Q40699357   07.2015/JCPSP.495497
Q40699344   07.2015/JCPSP.510513
Q40809910   06.2015/JCPSP.399402
Q40809896   06.2015/JCPSP.431433
Q40858054   0161901/AIM.0011
Q40862308   12.2015/JCPSP.867869
Q40904406   05.2015/JCPSP.350353
Q40904399   05.2015/JCPSP.363366
Q40978175   IJIV12I3A4
Q40975423   JSC.2015.9.4.219
Q41056237   DOI:10.11817/J.ISSN.1672-7347.2015.07.004
Q41117738   11.2015/JCPSP.794797
Q41172764   015186/AIM.004
Q41372245   JSC.2010.4.4.191
Q41418329   IJIV12I1A3
Q41470804   02.2015/JCPSP.104107
Q41470798   02.2015/JCPSP.108110
Q41554996   01.2015/JCPSP.2226
Q41565082   0151801/AIM.009
Q41570966   IJIV11I4A1
Q41570959   IJIV11I4A7
Q41597496   0151807/AIM.0010
Q41593958   11.2014/JCPSP.S196S197
Q41593946   11.2014/JCPSP.S211S213
Q41592417   DOI: 10.4415/ANN_14_04_13
Q41672881   DOI: 10.4415/ANN_14_04_06
Q41672874   DOI: 10.4415/ANN_14_04_07
Q41679688   0141711/AIM.008
Q41746132   0141709/AIM.006
Q41718922   05.2015/JCPSP.324327
Q41984124   12.2010/JCPSP.837838
Q42166469   /S0034-98872010000200005
Q42166479   /S0034-98872010000200007
Q42166525   /S0034-98872010000200013
Q42225754   03.2014/JCPSP.S50S51
Q42210768   06.2014/JCPSP.408411
Q42251146   12.2013/JCPSP.833836
Q42268492   DOI:10.7416/AI.2013.1944
Q42280841   013161/AIM.0012
Q42443694   /S0716-97602008000200011
Q42486128   04.2011/JCPSP.254256
Q42668709   07.2010/JCPSP.492493
Q42756478   /S0034-98872010000900004
Q42756458   /S0034-98872010000900013
Q42756455   /S0034-98872010000900015
Q42756446   /S0034-98872010000900018
Q42753752   /S0034-98872010001100006
Q42753750   /S0034-98872010001100007
Q42753742   /S0034-98872010001100010
Q42753812   /S0034-98872010001200005
Q42753798   /S0034-98872010001200010
Q42741550   /S0034-98872010001300005
Q42741548   /S0034-98872010001300006
Q42741527   /S0034-98872010001300016
Q42753718   /S0716-10182010000700005
Q42756436   /S0716-97602010000300008
Q42770839   IJIV7I4A2
Q42856593   09.03/IJAAI.169173
Q26779772   0151811/AIM.0010
Q28085072   0151812/AIM.0011
Q29310691   DOI:10.1016/S0378-8741(03)00007-2
Q30235962   0172002/AIM.0011
Q30491436   SMW.2017.14423
Q30719178   MAGYONKOL.2013.57.4.240
Q30875172   0141712/AIM.008
Q33168872   SMW.2017.14462
Q33275071   MAGYONKOL.2013.57.4.269
Q33395100   011143/AIM.0010
Q33397889   011146/AIM.009
Q33379922   05.2008/JCPSP.282285
Q33381069   07.03/IJAAI.169175
Q33392331   09.03/IJAAI.181183
Q33358353   IJIV3I4A2
Q33419879   01.2015/JCPSP.3134
Q33420618   02.2015/JCPSP.119123
Q33521394   12.2009/JCPSP.796797
Q33611806   DOI: 10.4415/ANN_10_02_10
Q33747173   04.2010/JCPSP.738743
Q33917992   CLICA1106871877
Q34026701   011143/AIM.0018
Q34023998   DOI: 10.4415/ANN_10_03_10
Q34223746   04.2012/JCPSP.267268
Q34347855   013166/AIM.0010
Q34624902   010136/AIM.008
Q34614057   1396673/DOT.2009.45.8.1396673
Q34776281   03.2008/JCPSP.190192
Q34779825   2008/19/SMW-11971
Q35000535   CLICA090913191319
Q34981745   SMW-12342
Q35071824   MAGYONKOL.2013.57.4.232
Q35577765   0151803/AIM.004
Q35725383   CLICA150811751181
Q35776797   09.2015/JCPSP.654657
Q36294427   CVJ-21.016
Q36334388   JSC.2009.4.1.29
Q36524349   I 10.12788/JCSO.0058
Q36726673   0.1016/0378-1119(94)90167-8
Q37041443   CVJ-21.074
Q37073363   CVJ-21.008
Q37102033   IJIV5I1A1
Q37117703   2008/11/SMW-10387
Q37186839   05.2008/JCPSP.321322
Q37293933   /AOP/SMW-AOP12276
Q37308163   /AOP/SMW-AOP12283
Q37355497   IJIV5I4A1
Q37389069   SMW-12447
Q37377688   SMW-12468
Q37398719   SMW-12166
Q37487740   SMW-12365
Q37487749   SMW-12465
Q37634033   SMW-12517
Q37617193   SMW-12528
Q37643471   1396674/DOT.2009.45.9.1414786
Q37635774   1396675/DOT.2009.45.8.1396675
Q37641887   SMW-12707
Q37672997   1396674/DOT.2009.45.10.1427441
Q37748623   SMW-12995
Q37816083   09.04/IJAAI.191206
Q37856610   0.4415/ANN_11_01_05
Q37849271   012153/AIM.0013
Q37906230   DOI: 10.1227/NEU.0B013E318218C78F
Q37975086   01.2012/JCPSP.6668
Q37972321   012151/AIM.0012
Q37970965   DOI: 10.4415/ANN_11_04_06
Q37970967   DOI: 10.4415/ANN_11_04_07
Q37970970   DOI: 10.4415/ANN_11_04_12
Q38023828   011.02/IJAAI.89109
Q38020905   012157/AIM.0013
Q38029134   012158/AIM.008
Q38005866   05.2012/JCPSP.311316
Q38005867   05.2012/JCPSP.335337
Q38071365   01.2013/JCPSP.9798
Q38068058   DOI: 10.4415/ANN_12_04_05
Q38068061   DOI: 10.4415/ANN_12_04_08
Q38125818   0013168/AIM.004
Q38110914   013166/AIM.009
Q38117670   013167/AIM.0010
Q38160944   0131611/AIM.0010
Q38170452   0131612/AIM.007
Q38168640   12.2013/JCPSP.878884
Q38203910   014174/AIM.0012
Q38223516   DOI: 10.4415/ANN_14_02_07
Q38293866   12.2014/JCPSP.935939
Q38257829   DOI: 10.4415/ANN_14_03_09
Q38293149   DOI: 10.4415/ANN_14_04_03
Q38243386   JSC.2014.9.2.93
Q38243339   JSC.2014.9.3.127
Q38306410   0151801/AIM.0012
Daniel-Mietchen commented 6 years ago

Some of those — e.g. those with DOIs of the form "DOI: 10.4415/ANN_11_04_06" (cf. Q37970965) — look like a simple fix, which I will look into later.

I am beginning to think, though, that the best way forward may actually be to keep the wrong DOI statements in Wikidata and to deprecate them there. Given that two reputable sources agree on the values, however, claiming such deprecation would require a reference that attests to the erroneousness of these DOI values, which does not yet exist outside this ticket and the DOI Handbook.

Daniel-Mietchen commented 6 years ago

The next batch of 400 (the Wikidata query times out for 500 now, and offsets to get beyond 400 don't work for me either right now):

Q38341640   015182/AIM.0017
Q38405721   015184/AIM.009
Q38456105   CLICA121218711878
Q38459734   JSC.2015.9.4.269
Q38553664   07.2015/JCPSP.519524
Q38587640   09.2015/JCPSP.680688
Q38594233   IJIV12I1A1
Q38675783   :10.1922/CDH_4073SONODA04
Q38660509   0172007/AIM.005
Q38660505   0172007/AIM.006
Q38672621   SMW.2017.14445
Q38710855   0172006/AIM.0010
Q38716190   SMW.2017.14437
Q38684771   SMW.2017.14463
Q38729951   0172004/AIM.003
Q38742443   SMW.2017.14418
Q38742448   SMW.2017.14419
Q38797328   0161904/AIM.0012
Q38770959   0161905/AIM.007
Q38834414   0161905/AIM.0011
Q38834417   0161905/AIM.0012
Q38847771   IJIV13I2A5
Q38877014   0151805/AIM.006
Q38891421   SMW.2017.14409
Q38891407   SMW.2017.14416
Q38891412   SMW.2017.14420
Q38950290   0151811/AIM.0013
Q39133244   IJIV10I2A4
Q39169338   DOI: 10.4415/ANN_14_02_03
Q39204713   0141707/AIM.003
Q39205812   05.2014/JCPSP.S115S116
Q39218475   NO_DOI/1491233844057
Q39233111   0141703/AIM.007
Q39247331   06.2012/JCPSP.349352
Q39236678   12.2012/JCPSP.778782
Q39302844   06.2009/JCPSP.350353
Q39294783   DOI: 10.4415/ANN_12_02_05
Q39294970   SMW.2017.14428
Q39320265   011.02/IJAAI.121132
Q39349354   JSC.2010.5.3.117
Q39387497   0161909/AIM.0011
Q39394134   IJIV10I2A1
Q39427773   SMW.2017.14447
Q39470650   0161908/AIM.007
Q39836309   08112/AIM.0016
Q39845417   03.2008/JCPSP.147150
Q39881526   08.04/IJAAI.205210
Q39843718   08113/AIM.0015
Q39921249   03.2016/JCPSP.173176
Q39921241   03.2016/JCPSP.195198
Q39918152   SMW-12927
Q39920753   SMW-12975
Q39962050   0161903/AIM.003
Q39944626   04.2010/JCPSP.533537
Q39988927   07.2011/JCPSP.325329
Q39991490   SMW-12381
Q40026120   02.2012/JCPSP.163167
Q39997565   02.2016/JCPSP.125129
Q40005897   IJIV5I1A3
Q40004005   SMW-12489
Q40045208   07.2012/JCPSP.455457
Q40047171   2008/35/SMW-12108
Q40053227   DOI:10.2223/JPED.2193
Q40065178   DOI:10.2223/JPED.2211
Q40067013   SMW.2017.14497
Q40086363   01.2016/JCPSP.3640
Q40086347   01.2016/JCPSP.7475
Q40095440   012.01/IJAAI.5762
Q40077774   0121512/AIM.004
Q40095033   03.2008/JCPSP.137141
Q40095027   03.2008/JCPSP.158162
Q40141440   0131610/AIM.007
Q40141500   0151809/AIM.0013
Q40129316   CLICA151218011807
Q40183041   04.2014/JCPSP.256260
Q40157779   04.2015/JCPSP.S17S18
Q40184432   12.2015/JCPSP.863866
Q40184409   12.2015/JCPSP.911913
Q40221030   0141709/AIM.0010
Q40199489   0172005/AIM.0012
Q40199485   0172005/AIM.0013
Q40230145   11.2013/JCPSP.815817
Q40226081   12.2013/JCPSP.902903
Q40229557   CLICA1705699706
Q40244574   06.2013/JCPSP.437439
Q40274203   IJIV14I1A2
Q40278947   IJIV14I1A4
Q40283400   SMW.2017.14411
Q40319648   0011144/AIM.0016
Q40326608   011143/AIM.0015
Q40309032   0151809/AIM.004
Q40304600   015188/AIM.009
Q40329161   04.2011/JCPSP.219222
Q40345721   01.2016/JCPSP.2326
Q40368637   0172001/AIM.008
Q40353463   06.2010/JCPSP.386390
Q40380809   09.2009/JCPSP.566569
Q40404018   12.2008/JCPSP.740743
Q40459510   0151810/AIM.009
Q40493634   IJIV12I3A3
Q40535657   09.2015/JCPSP.675679
Q40636043   CLICA160710391045
Q40634304   IJIV13I2A6
Q40705423   0161906/AIM.003
Q40699369   07.2015/JCPSP.478481
Q40699352   07.2015/JCPSP.498500
Q40788947   IJIV12I2A1
Q40862977   0.1038/35019592
Q40853098   015186/AIM.005
Q40854304   03.2016/JCPSP.230231
Q40862298   12.2015/JCPSP.909910
Q40889305   0151812/AIM.008
Q40936340   CLICA151116531658
Q41033309   04.2015/JCPSP.259263
Q41117726   11.2015/JCPSP.815818
Q41113314   DOI:10.11817/J.ISSN.1672-7347.2015.06.018
Q41135696   IJIV12I2A3
Q41183271   CLICA151116811688
Q41218474   03.2015/JCPSP.202205
Q41300492   04.2015/JCPSP.247249
Q41454366   08.2015/JCPSP.602605
Q41554987   01.2015/JCPSP.2730
Q41597502   0151807/AIM.006
Q41592443   DOI: 10.4415/ANN_14_04_09
Q41648780   CLICA141217711778
Q41670411   12.2014/JCPSP.902907
Q41670404   12.2014/JCPSP.908913
Q41705293   0141710/AIM.0015
Q41734271   09.2014/JCPSP.624627
Q41734250   09.2014/JCPSP.695697
Q41712315   DOI: 10.4415/ANN_14_03_12
Q41916657   0151810/AIM.0013
Q41955233   0.1017/DMP.2015.51
Q41964708   0141701/AIM.0010
Q41940956   04.2008/JCPSP.257258
Q41938760   08.2008/JCPSP.520521
Q41935815   IJIV14I3A1
Q42144693   04.2015/JCPSP.S33S35
Q42166476   /S0034-98872010000200006
Q42164093   08113/AIM.0010
Q42164126   08113/AIM.0017
Q42232233   0141701/AIM.0012
Q42237012   DOI: 10.4415/ANN_13_04_12
Q42246301   IJIV10I4A6
Q42231217   IJIV11I1A1
Q42264833   0131610/AIM.0015
Q42273853   013163/AIM.0015
Q42269040   DOI: 10.4415/ANN_13_01_09
Q42266525   DOI: 10.4415/ANN_13_03_09
Q42288883   0121511/AIM.0014
Q42638575   11.2009/JCPSP.744746
Q42655918   02.2010/JCPSP.106111
Q42652117   DOI: 10.4415/ANN_14_01_05
Q42741557   /S0034-98872010001300002
Q42741546   /S0034-98872010001300007
Q42741567   /S0716-97602010000400003
Q42753740   /S0034-98872010001100011
Q42753738   /S0034-98872010001100012
Q42753734   /S0034-98872010001100013
Q42753731   /S0034-98872010001100015
Q42753821   /S0034-98872010001200002
Q42753810   /S0034-98872010001200006
Q42753795   /S0034-98872010001200011
Q42753784   /S0034-98872010001200015
Q42753781   /S0034-98872010001200016
Q42753769   /S0034-98872010001200020
Q42756486   /S0034-98872010000900002
Q42756461   /S0034-98872010000900012
Q42783028   /S0034-98872010000800006
Q42783023   /S0034-98872010000800008
Q42783016   /S0034-98872010000800012
Q42782996   /S0034-98872010000800020
Q42782992   /S0034-98872010000800021
Q42778827   /S0716-97602010000100002
Q42778818   /S0716-97602010000100013
Q42769475   011141/AIM.008
Q42762066   12.2010/JCPSP.802805
Q42762062   12.2010/JCPSP.822824
Q42788286   CLICA101218071813
Q42788281   CLICA101218201827
Q42843964   /S0716-97602010000200001
Q42840600   010136/AIM.0020
Q26999319   013161/AIM.0014
Q28843411   DOI:10.1006/KNAC.1993.1008
Q30061902   0161911/AIM.0011
Q30379614   IJIV12I3A5
Q30382601   SMW-12952
Q30395614   TUFFC.2015.007202
Q30852031   15.13155/NCOMMS11317
Q31063185   CLICA1604573578
Q33165886   06.2015/JCPSP.403406
Q33160444   09.2011/JCPSP.572573
Q33158024   11.2009/JCPSP.686689
Q33321013   08112/AIM.004
Q33345778   DOI:10.1017/S1740925X04000110
Q33406200   012.01/IJAAI.5056
Q33414481   04.2014/JCPSP.285287
Q33378858   IJIV5I1A7
Q33418515   0141711/AIM.0016
Q33420137   015182/AIM.0010
Q33419390   11.2014/JCPSP.S216S218
Q33456963   013162/AIM.006
Q33478092   07.2009/JCPSP.440443
Q33492701   08.02/IJAAI.7784
Q34118412   JSC.2012.7.3.181
Q34336803   04.2013/JCPSP.293294
Q34431011   014178/AIM.0013
Q34458542   0121511/AIM.0010
Q34479994   015186/AIM.0016
Q34696158   DOI 10.2310/7290.2014.00020
Q34775727   02.2008/JCPSP.7881
Q35790023   CLICA151015051511
Q35804458   012151/AIM.007
Q35856377   0151812/AIM.0010
Q35938904   0161903/AIM.008
Q36355758   CLICA1705715721
Q37057971   2007/49/SMW-11986
Q37041811   CVJ-21.001
Q37041794   CVJ-21.007
Q37073300   CVJ-21.004
Q37077532   CVJ-21.006
Q37073346   CVJ-21.015
Q37222381   2008/27/SMW-12153
Q37438707   04.2009/JCPSP.223227
Q37520755   SMW-12476
Q37520751   SMW-12584
Q37560786   SMW-12270
Q37634034   SMW-12667
Q37634037   SMW-12742
Q37666883   SMW-12661
Q37641882   SMW-12741
Q37673071   SMW-12953
Q37766732   DOI: 10.4415/ANN_10_02_03
Q37760429   JSC.2009.4.1.57
Q37734974   SMW-12977
Q37824845   011141/AIM.0010
Q37789578   DOI: 10.4415/ANN_10_03_09
Q37848397   011142/AIM.0019
Q37855216   04.2009/JCPSP.228231
Q37853832   12.2009/JCPSP.772775
Q37857914   IJIV5I1A5
Q37906207   DOI: 10.1227/NEU.0B013E31820A19FC
Q37994665   011.01/IJAAI.113
Q37980188   012152/AIM.007
Q37970968   DOI: 10.4415/ANN_11_04_08
Q37982314   JSC.2010.5.4.177
Q38023829   011.02/IJAAI.111119
Q38040592   011.03/IJAAI.203216
Q38055881   0121511/AIM.0013
Q38029135   012158/AIM.0010
Q38059327   11.2012/JCPSP.711715
Q38058175   DOI: 10.3113/FAI.2012.0969
Q38058176   DOI: 10.3113/FAI.2012.1031
Q38071363   01.2013/JCPSP.7782
Q38071364   01.2013/JCPSP.8385
Q38063388   TA.0B013E3182754654
Q38085985   012.01/IJAAI.117
Q38077599   013162/AIM.0013
Q38083749   013163/AIM.0012
Q38111584   DOI: 10.4244/EIJV9SRA10
Q38114798   DOI: 10.4415/ANN_13_02_14
Q38137318   09.2013/JCPSP.653656
Q38166398   DOI: 10.11607/JOMI.TE29
Q38160333   JSC.2013.7.4.245
Q38177438   01.2014/JCPSP.6061
Q38195352   0141703/AIM.0013
Q38195348   0141703/AIM.004
Q38201612   DOI: 10.4415/ANN_14_01_12
Q38201957   JSC.2014.8.3/4.189
Q38232878   07.2014/JCPSP.508514
Q38243387   JSC.2014.9.2.107
Q38325580   01.2015/JCPSP.4145
Q38390194   0141709/AIM.0011
Q38405735   015184/AIM.0012
Q38378874   03.2015/JCPSP.210215
Q38410646   0161901/AIM.0010
Q38477899   014174/AIM.009
Q38522485   015186/AIM.0011
Q38678879   0161901/AIM.0012
Q38675664   12.2015/JCPSP.891896
Q38657235   SMW.2017.14470
Q38703419   01.2016/JCPSP.5159
Q38684775   SMW.2017.14474
Q38722765   NO_DOI/1497537194790
Q38764868   0161906/AIM.009
Q38782854   0172005/AIM.0010
Q38782867   0172005/AIM.003
Q38794891   SMW.2017.14429
Q38901613   011.03/IJAAI.253258
Q38891013   015184/AIM.006
Q38911422   0172003/AIM.0012
Q38911432   0172003/AIM.005
Q38911428   0172003/AIM.008
Q38878936   JSC.2015.9.4.243
Q38887828   NO_DOI/1490108138367
Q38924453   JSC.2015.10.4.217
Q38997521   015186/AIM.006
Q38971948   DOI 10.2310/7290.2014.00021
Q38976978   SMW.2017.14401
Q39080326   IJIV13I4A7
Q39194806   01.2016/JCPSP.6062
Q39201616   03.2013/JCPSP.234236
Q39213874   01.2014/JCPSP.4346
Q39212358   02.2016/JCPSP.156157
Q39222397   08.2013/JCPSP.533537
Q39245733   11.2012/JCPSP.690693
Q39215294   MAGYONKOL.2013.57.4.275
Q39320259   011.02/IJAAI.165173
Q39311076   07.04/IJAAI.221229
Q39291760   08.03/IJAAI.165168
Q39311986   2008/43/SMW-12288
Q39348707   IJIV13I3A6
Q39427785   SMW.2017.14440
Q39452256   015188/AIM.0017
Q39455973   IJIV10I1A7
Q39618427   0151805/AIM.0014
Q39687758   11.2011/JCPSP.662665
Q39766504   0161905/AIM.004
Q39803971   DOI: 10.4415/ANN_10_04_01
Q39845141   02.2008/JCPSP.9597
Q39836318   08112/AIM.0018
Q39879550   IJIV13I1A1
Q39871689   IJIV6I1A3
Q39897126   SMW-12607
Q39938102   2008/37/SMW-12385
Q39939923   IJIV5I3A3
Q39903205   IJIV5I4A3
Q39948512   010135/AIM.005
Q39962033   0161903/AIM.007
Q39997582   02.2016/JCPSP.9195
Q39983128   05.2009/JCPSP.287290
Q39963481   DOI: 10.4415/ANN_10_04_03
Q39967340   IJIV6I2A3
Q40018752   012152/AIM.0010
Q40031386   012155/AIM.007
Q40030394   0161902/AIM.0011
Q40058082   SMW.2017.14472
Q40084326   SMW.2017.14482
Q40114066   03.2016/JCPSP.223224
Q40147102   0172006/AIM.004
Q40147078   0172006/AIM.009
Q40157770   04.2015/JCPSP.S20S21
Q40157763   04.2015/JCPSP.S30S32
Q40157540   DOI: 10.4415/ANN_13_04_04
Q40153603   IJIV14I2A6
Q40199395   07.2014/JCPSP.472476
Q40184435   12.2015/JCPSP.860862
Q40232432   0141711/AIM.006
Q40219029   02.2014/JCPSP.114117
Q40210953   03.2014/JCPSP.S20S21
Q40274489   04.2015/JCPSP.276280
Q40247831   05.2013/JCPSP.359361
Q40265315   12.2012/JCPSP.803805
Q40244757   12.2014/JCPSP.940943
Q40320284   07.2011/JCPSP.369370
Q40301420   DOI:10.5152/TPD.2011.59
Q40312037   MAGYONKOL.2011.55.3.155
Q40334773   0172002/AIM.006
Q40349644   09.2010/JCPSP.581585
Q40362009   0172001/AIM.0013
Q40388125   06.2009/JCPSP.393394
Q40420132   01.2008/JCPSP.3739
Q40415641   0161912/AIM.006
Q40419797   03.2008/JCPSP.163167
Q40419164   2008/17/SMW-12051
Q40407740   CLICA1701117123
Q40459519   0151810/AIM.004
Q40493629   IJIV12I3A6
Q40568880   0161908/AIM.0014
Q40613986   0161908/AIM.0010
Q40609559   08.2015/JCPSP.625626
Q40674744   0161905/AIM.0010
Q40674739   0161905/AIM.0013
Q40699362   07.2015/JCPSP.486490
Q40680985   CLICA1607973979
Q40751373   0151807/AIM.007
Q40904393   05.2015/JCPSP.386388
Q40919757   0037-8682-0004-2015
Q40997671   09.2015/JCPSP.671674
Q41215948   0151803/AIM.005
Q41218490   03.2015/JCPSP.176180
Q41218458   03.2015/JCPSP.223224
Q41431510   010136/AIM.0022
Q41470813   02.2015/JCPSP.100103
Q41454375   08.2015/JCPSP.588591
Q41463562   CLICA1503359365
Q41565075   0151801/AIM.0015
Q41591390   12.2014/JCPSP.914917
Q41629123   0151801/AIM.0010
Q41657817   11.2014/JCPSP.840844
Q41718907   05.2015/JCPSP.354358
Q41918472   02.2015/JCPSP.129133
Q41929900   0141707/AIM.0014
Q41930630   0172005/AIM.0014
Q42003021   2008/19/SMW-12056
Q42166443   /S0034-98872010000200002
Q42166458   /S0034-98872010000200004
Q42166548   /S0034-98872010000200016
Q42164111   08113/AIM.0014
Q42210773   06.2014/JCPSP.392395
Daniel-Mietchen commented 6 years ago

Those 400 are now fixed as well (sample edit).

Daniel-Mietchen commented 6 years ago

The next 50 (everything larger times out):

Q42249720   013169/AIM.007
Q42239424   02.2014/JCPSP.97100
Q42256978   IJIV10I2A6
Q42437714   JSC.2012.7.3.127
Q42475117   SMW-12718
Q42510065   012158/AIM.0016
Q42644893   012155/AIM.0012
Q42722644   012151/AIM.009
Q42783032   /S0034-98872010000800004
Q42783030   /S0034-98872010000800005
Q42783014   /S0034-98872010000800013
Q42783005   /S0034-98872010000800016
Q42783002   /S0034-98872010000800017
Q42753760   /S0034-98872010001100003
Q42753722   /S0034-98872010001100018
Q42753805   /S0034-98872010001200008
Q42753802   /S0034-98872010001200009
Q42753792   /S0034-98872010001200012
Q42753776   /S0034-98872010001200018
Q42753773   /S0034-98872010001200019
Q42741531   /S0034-98872010001300014
Q42741526   /S0034-98872010001300017
Q42756443   /S0716-97602010000300005
Q42741559   /S0716-97602010000400011
Q42762067   12.2010/JCPSP.794797
Q42813472   04.2010/JCPSP.748752
Q42843955   /S0716-97602010000200007
Q42841266   CLICA101117111717
Q26991595   0141712/AIM.009
Q28870154   DOI:10.1080/03115518308619633
Q29042780   DOI:10.7925/DRS1.UCDLIB_45928
Q30248376   0161908/AIM.0012
Q30235309   0172003/AIM.0011
Q30371741   07.2008/JCPSP.445450
Q30414367   012154/AIM.0014
Q30399859   02.2011/JCPSP.97102
Q33160770   12.2011/JCPSP.769771
Q33331609   02.2008/JCPSP.102104
Q33380977   06.2008/JCPSP.362368
Q33368033   07.03/IJAAI.115131
Q33369489   2008/35/SMW-12273
Q33433002   0161906/AIM.0010
Q33400236   02.2012/JCPSP.192193
Q33428354   04.2009/JCPSP.219222
Q33419394   11.2014/JCPSP.S253S255
Q33427612   11.2015/JCPSP.802806
Q33527773   CLICA1002268272
Q33511273   SMW-12767
Q33650452   04.2010/JCPSP.524527
Q33644679   SMW-12768
Daniel-Mietchen commented 6 years ago

Those 50 are fixed too (sample edit).

fnielsen commented 6 years ago

Would it be better to deprecate rather than delete?

Daniel-Mietchen commented 6 years ago

@fnielsen Yes, deprecation seems to be better, but we need to annotate the deprecation properly (see my comment above), so I think it's OK to remove it for now, but we should eventually put it back in as deprecated, ideally along with whatever valid DOIs these articles actually do have.

Meanwhile, I checked the Wikidata query again, and while it timed out in the Wikidata Query Service, it ran through in the Linked Data Fragments).%0A%20%20%7D) endpoint, giving 0 results as of now.

Actually, re-running it with a limit 1 still yields a result (Q33810881), which I'm thus using to play around with how to indicate the deprecation.

This query gives a list of reasons used in "reason for deprecation" (P2241) statements:

SELECT DISTINCT ?reason ?reasonLabel  WHERE {
  ?statement pq:P2241 ?reason.
  SERVICE wikibase:label { bd:serviceParam wikibase:language "[AUTO_LANGUAGE],en". }
}

Of these, error (Q29485) seemed the most plausible, so I used that on Q33810881.

Daniel-Mietchen commented 6 years ago

I went randomly through some more entries in the list and have not found any case yet where the PMC/ PubMed entries were correct.

Daniel-Mietchen commented 6 years ago

Summary of today's batch edits, as per https://tools.wmflabs.org/quickstatements/#mode=batches :


2180 | Daniel Mietchen | More odd DOIs, as per https://github.com/br2s/bug-reports-to-science/issues/8 | DONE DONE:50 | 2018-03-13 12:01:19 |  
2179 | Daniel Mietchen | More odd DOIs, as per https://github.com/br2s/bug-reports-to-science/issues/8 | DONE DONE:400 | 2018-03-13 11:39:42 |  
2178 | Daniel Mietchen | More odd DOIs, as per https://github.com/br2s/bug-reports-to-science/issues/8 | DONE DONE:500 | 2018-03-13 11:16:10 |  
2177 | Daniel Mietchen | next try | DONE DONE:199 \| RUN:1 | 2018-03-13 10:26:18 |  
2176 | Daniel Mietchen | remove incorrect DOI statements | DONE ERROR:200 | 2018-03-13 10:20:33
Daniel-Mietchen commented 6 years ago

Update: LDF).%0A%20%20%7D) just found 16 new cases, all from items that had been started after the above cleanup.

Daniel-Mietchen commented 5 years ago

For a related discussion, see https://twitter.com/27point7/status/1070818580789383168 .

Current counts

Daniel-Mietchen commented 4 years ago

I just checked the example from https://github.com/br2s/bug-reports-to-science/issues/8#issuecomment-372624264 again, i.e. a DOI of "2717", which is still stated at both

Interestingly, the new PubMed interface at https://pubmed.ncbi.nlm.nih.gov/28302227 does not show the invalid DOI any more.

Daniel-Mietchen commented 2 years ago

Update: I just checked for that sample DOI "2717" again, and while it is still there at PubMed, it is not in Europe PMC any more.

I also came across a publisher's report about wrong DOIs: https://doi.org/10.1515/freq-2016-9001 .

By now, I have also started a ticket about incorrect ORCIDs:

Daniel-Mietchen commented 2 years ago

Here is also a publisher correction for an incorrect DOI for a cited reference: https://doi.org/10.1038/s41593-020-00755-8 .