Configure tdt_datasets folder

brain-bican / taxonomy-development-tools

Tools to build and edit Cell Annotation Schema taxonomies.

Apache License 2.0

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Configure tdt_datasets folder #145

Closed hkir-dev closed 8 months ago

hkir-dev commented 8 months ago

Story:

Description

TDT datasets folder is located at $HOME/tdt_datasets by default. But due to the potential size of this folder, users may prefer to use a shared drive (mounted volume) for this purpose.

Users should be able to specify the location of the tdt_datasets folder form the project configuration yaml.

hkir-dev commented 8 months ago

Support added for linux and macOS system with https://github.com/brain-bican/taxonomy-development-tools/commit/4c3168bdc7f2004e504dbf7499ed4c06ee4d0149

Windows based solution couldn't implemented due to lack of related test environment.

hkir-dev commented 8 months ago

It is observed that using a network drive is significantly slowing down the AnnData related actions such as Export > To CAS and Export > To AnnData.