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brain-bican / taxonomy-development-tools

Tools to build and edit Cell Annotation Schema taxonomies.
Apache License 2.0
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On initial load - pull cell IDs from linked anndata file for clusters only #90

Open dosumis opened 6 months ago

dosumis commented 6 months ago

Clusters should be stable while the community annotates. Changing cluster-cell-id mappings should be possible, but not a regular editing step.

Challenge: storing cell IDs on GitHub => potential file size problem.

Potential solutions:

  1. Use CAS file release product as reference
  2. Store as compressed, partitioned files on GitHub that we re-assemble as needed (but will this cause problems for diffs?)