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brain-life / o3d-code

Open Derivatives Diffusion Data scripts used to generate and organize the data
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Change reference anatomy #26

Closed Paolopost closed 7 years ago

Paolopost commented 7 years ago

In all the scripts related to tractography: init_tracking_dtidet_trk init_tracking_csddet_trk init_tracking_csdprob_trk dissection_afq_trk init_tracking_dtidet_tck init_tracking_csddet_tck init_tracking_csdprob_tck dissection_afq_tck the reference anatomy should be the dwi nifti image in [..]/derivative/preprocess folder. It means that it will be not possible to call the script above before init_preprocessing. I have already include this dependency in all_pipeline.sh