Add denoising to pipeline

brain-microstructure-exploration-tools / abcd-noddi-tbss-experiments

experiments with neuroimaging pipelines that use noddi and tbss

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Add denoising to pipeline #17

Closed ebrahimebrahim closed 4 months ago

ebrahimebrahim commented 6 months ago

Consider dipy.denoise.nlmeans.nlmeans or Patch2Self. NLMeans is standard and can be used on single images. Patch2Self is diffusion image only (for now) but it is also in dipy and makes no smoothness assumptions (or any assumptions) about the signal.