brain-microstructure-exploration-tools / abcd-registration-experiments

experiments with diffusion image registration
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Create tract warping figure for the progress report #9

Closed jamesfishbaugh closed 2 months ago

jamesfishbaugh commented 3 months ago

I've been working on the progress report and could use a figure that helps describe our evaluation methodology.

It'd be nice to show 3D views of fiber bundles as follows for two subjects:

We could use for example the AF for this demo, or whatever

jamesfishbaugh commented 3 months ago

Here is the current version of the figure.

Image

ebrahimebrahim commented 3 months ago

Beautiful! Is that paraview for the lower ones?

How's this for a caption:

Fiber tracts being warped in order to be compared via a tract distance metric. This is an example of the AF tract from two subjects in our processed data, with a bundle being warped along the whole-image registration transform between the subjects.

Please feel free to edit the caption here on on overleaf (ask for invite if i havent sent it)

ebrahimebrahim commented 3 months ago

Could add the svg to graphics drive folder

jamesfishbaugh commented 3 months ago

I do need an invite for overleaf (jfishbaugh@gmail.com).