GSoC - Implementation of the boostrap

brainets / hoi

Higher-Order Interactions

https://brainets.github.io/hoi/

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GSoC - Implementation of the boostrap #3

Open EtienneCmb opened 1 year ago

EtienneCmb commented 1 year ago

Python implementation of the boostraps for selecting significant multiplets + confidence interval estimation. For reference, here's the matlab version.

[ ] For the resampling, we should directly use scikit-learn. You can also look at a past implementation. The function defining the indices for resampling should be added to hoi/core/combinatory.py
[ ] Compute significance, CI and comparison between orders

Mattehub commented 2 weeks ago

About this, I have already the functions for computing, in the case of 2-dimensional data the confidence interval of each multiplet. In case it is useful I can clean them and push them. Let me know.

EtienneCmb commented 2 weeks ago

I planned to make an example instead. I'll make an example showcasing CI and significance testing using Frites.

Mattehub commented 2 weeks ago

Ok, super!