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brainglobe / brainglobe-atlasapi

A lightweight python module to interact with atlases for systems neuroscience
https://brainglobe.info/documentation/brainglobe-atlasapi/index.html
BSD 3-Clause "New" or "Revised" License
117 stars 24 forks source link

[Feature] Smooth Kim meshes #306

Open alessandrofelder opened 4 weeks ago

alessandrofelder commented 4 weeks ago

Is your feature request related to a problem? Please describe. Kim mouse meshes look jagged: image (2)

Describe the solution you'd like Make meshes of the kim_mouse atlas smoother (hopefully setting smooth = True at https://github.com/brainglobe/brainglobe-atlasapi/blob/e1741bf3eaa73fb1efeb9310e34960f20386ca6e/brainglobe_atlasapi/atlas_generation/atlas_scripts/kim_mouse.py#L131 is enough)

Describe alternatives you've considered

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Additional context Thanks to @simonweiler for reporting

alessandrofelder commented 4 weeks ago

Related to #279 as that atlas will not need upsampling