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brainglobe / brainglobe-heatmap

Rendering anatomical heatmaps with brainrender and matplotlib
https://brainglobe.info
MIT License
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Testing out the examples #4

Closed vigji closed 2 years ago

vigji commented 2 years ago

I'm testing out the heat map 2D example and out of the box after installation I get this:

Screenshot 2022-01-21 at 14 19 54

It feels like the sorting fails for a portion of the root mask, is this something that happens for you as well?

FedeClaudi commented 2 years ago

The plane needs to be big enough such that it slices the entire mesh. I thought I had fixed it but it was still a bit too small, now it's okay:

image