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brainglobe / brainglobe-heatmap

Rendering anatomical heatmaps with brainrender and matplotlib
https://brainglobe.info
MIT License
34 stars 10 forks source link

Update orientation for allen cord example #53

Closed adamltyson closed 2 months ago

adamltyson commented 2 months ago

Now the allen cord atlas has been updated, and the meshes are in the correct orientation, this example needs to be updated. The saggital orientation didn't make much sense for the cord example. This new script makes the figure as expected: Screenshot from 2024-07-22 12-29-34

codecov[bot] commented 2 months ago

Codecov Report

All modified and coverable lines are covered by tests :white_check_mark:

Project coverage is 0.00%. Comparing base (7044b19) to head (3aa62bd).

Additional details and impacted files ```diff @@ Coverage Diff @@ ## main #53 +/- ## ===================================== Coverage 0.00% 0.00% ===================================== Files 5 5 Lines 280 280 ===================================== Misses 280 280 ```

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imagesc-bot commented 2 months ago

This pull request has been mentioned on Image.sc Forum. There might be relevant details there:

https://forum.image.sc/t/allen-spinal-cord-atlas-appears-disfigured-in-python/99256/9