brainglobe / brainglobe-workflows

Workflows that utilise BrainGlobe tools to perform data analysis and visualisation.
BSD 3-Clause "New" or "Revised" License
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naive attempt at fixing HDF5 #100

Closed alessandrofelder closed 2 months ago

alessandrofelder commented 2 months ago

Description

What is this PR

Why is this PR needed?

CI on macos-latest (now a Silicon runner) fails with error: subprocess-exited-with-error when installing scikit-image, when installing pytables (presumably) because HDF5 libraries are missing.

What does this PR do?

References

Partial solution to https://github.com/brainglobe/BrainGlobe/issues/63

How has this PR been tested?

This PR fixes the tests.

Is this a breaking change?

No

Does this PR require an update to the documentation?

No

Checklist:

codecov[bot] commented 2 months ago

Codecov Report

All modified and coverable lines are covered by tests :white_check_mark:

Project coverage is 79.38%. Comparing base (cd1079a) to head (cf40871).

Additional details and impacted files ```diff @@ Coverage Diff @@ ## main #100 +/- ## ======================================= Coverage 79.38% 79.38% ======================================= Files 18 18 Lines 917 917 ======================================= Hits 728 728 Misses 189 189 ```

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