search

brainglobe / brainglobe-workflows

Workflows that utilise BrainGlobe tools to perform data analysis and visualisation.
BSD 3-Clause "New" or "Revised" License
9 stars 2 forks source link

[BUG] bg_space -> brainglobe_space #84

Closed alessandrofelder closed 4 months ago

alessandrofelder commented 4 months ago

Describe the bug Reported by @Eddymorphling in https://github.com/brainglobe/brainglobe-workflows/issues/83#issuecomment-1959884804

when I run brainmapper -h, I get the below error.

(brainglobe_v2) [ivm@vn2013is10 ~]$ brainmapper -h Traceback (most recent call last): File "/home/ivm/conda/envs/brainglobe_v2/bin/brainmapper", line 5, in from brainglobe_workflows.brainmapper.main import main File "/home/ivm/conda/envs/brainglobe_v2/lib/python3.10/site-packages/brainglobe_workflows/brainmapper/main.py", line 15, in import bg_space as bgs



**To Reproduce**
Please enter full details of how to reproduce this bug.

**Expected behaviour**
A clear and concise description of what you expected to happen.

**Log file**
Please attach the log file if relevant (e.g. `output/cellfinder_2019-12-17_13-29-46.log`)

**Screenshots**
If applicable, add screenshots to help explain your problem.

**Computer used (please complete the following information):**

- OS: [e.g. Linux, Windows, macOS] For macOS, please specify if you have an Intel or M1 CPU (M1 is likely if your mac is new).
- Version [e.g. 18.04]
- Hardware specs [e.g. 128 GB RAM, Xeon 4114 CPU].

**Additional context**
Add any other context about the problem here.
alessandrofelder commented 4 months ago

Fixed by @sfmig in #82 - I'll make a release now.