brainglobe / cellfinder-core

Standalone cellfinder cell detection algorithm
https://brainglobe.info/documentation/cellfinder/index.html
BSD 3-Clause "New" or "Revised" License
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Standardise on one of "plane" or "layer" #136

Closed dstansby closed 1 year ago

dstansby commented 1 year ago

We (well, mainly me 😄 ) seem to be using "plane" and "layer" interchangably throughout the cell detection code, both in variable names and documentation. We should use one and standardise this across the codebase.

Any opinions?

alessandrofelder commented 1 year ago

I'd say "plane" is the commonly used word to denote the x-y plane in a 3d image stack. (Using plane has the extra advantage that we don't risk confusing it with napari layers?)