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brainhack-boston / brainhack-boston.github.io

Brainhack Boston
https://brainhack-boston.github.io
Apache License 2.0
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[PROJECT] Adding Niivue to ChRIS_ui #41

Open jennydaman opened 8 months ago

jennydaman commented 8 months ago

https://chrisproject.org/ is a web platform for running scientific + clinical software on the cloud, mostly used for neuroimaging. Our goal is to add support for using Niivue as an output file visualizer for the ChRIS user interface.

A use case of interest is to use ChRIS, Niivue, and the New England Research Cloud together as a showcase for some exemplar datasets and pipelines developed by our lab, the FNNDSC

In ChRIS, data and computational experiments are organized in "feeds." A feed can either be public or not public. Non-public feeds require authorization to view, whereas public feeds can be retrieved more easily. It is straightforward to use Niivue on public feed data, however https://github.com/niivue/niivue/issues/776 is blocking on the integration of Niivue and non-public feeds.

haehn commented 8 months ago

Love that - this will also allow Boostlet.org to run within the environment, if NiiVue is available as a global window.nv. :)

jennydaman commented 8 months ago

Hackathon follow-up: a week later, I have a MVP and a new open-source repo.

https://github.com/fnndsc/niivue-react https://app.fetalmri.org/niivue