Remi-Gau
commented
3 years ago @mszinte
As the project was already reviewed by the local event organizers there is no need for further review on our side. Will proceed with publication on the website. But if there are further changes you want to make ping us @brainhackorg/project-monitors
mszinte
Title
EyetrackPrep: an automatic tool to pre-process eye-tracking data (fixation, blinks, saccades, micro-saccade, pursuit, pupillometry)
Leaders
Martin Szinte @mszinte (github) @mszinte (mattermost)
Collaborators
Anna Montagnini Guillaume Masson
Brainhack Global 2021 Event
Brainhack Marseille
Project Description
Description: This project aims at providing to the eye-tracking research community a standardized software allowing the automatic computation and quality-check of eye-tracking data. This includes any records of eye position metrics such as fixation, eye movements (saccades, microsaccades, pursuit), blinks, and pupillometry.
EyeTrackPrep is meant in the future to be used by all researchers using eye-tracking data. It aims at simplifying and standardizing this domain to improve research reproducibility as well as the share of collected data.
Eye-tracking community lack such a tool even if a need for it is clear. Although this project might take time until a functional software is produced, it will modify for long term the way cognitive neuroscientists work and generate open science of high quality data akin what happened with the development of BIDS-apps from the neuroimaging community.
Link to project repository/sources
https://github.com/mszinte/eyetrackprep.git
Goals for Brainhack Global
Together with colleagues, we already thought of a few directions for EyeTrackPrep. The Brainhack will consist of discussions about the tool, its goals, what it should and what it should not include. Moreover, if we have more time we could code the modeling of eye movement metrics (e.g. saccade detection from eye-traking position time series) as well as some of the visualization for data quality check.
Good first issues
Agree on what such app should do (e.g. saccade, smooth pursuit analysis...)
Communication channels
https://mattermost.brainhack.org/brainhack/channels/eyetrackprep
Skills
Non-coding skills: knowledge of eyetracking data or interest in it Coding skills: Python basics
Onboarding documentation
No response
What will participants learn?
Eyetracking analysis: saccade and smooth pursuit analysis BIDS usage: using of tools to share and re-use your eyetracking datasets.
Data to use
No response
Number of collaborators
more
Credit to collaborators
Thérèse Collins Guillaume Masson Anna Montagnini Martin Rolfs Martin Szinte Tomas Knapen
Image
Type
data_management, method_development
Development status
0_concept_no_content
Topic
data_visualisation, other
Tools
BIDS, Jupyter, other
Programming language
Python
Modalities
eye_tracking
Git skills
0_no_git_skills, 1_commit_push, 2_branches_PRs
Anything else?
No response
Things to do after the project is submitted.
Hi @Brainhack-Global/project-monitors: my project is ready!