brainlife / app-AFQclean

(deprecated by Remove Tract Outliers App) This service cleans the output from AFQ and WMA using AFQ's AFQ_removeFiberOutliers function. For more information on the inputs of this application, please read the documentation at the top of the function: https://github.com/yeatmanlab/AFQ/blob/master/functions/AFQ_removeFiberOutliers.m
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Added output to product.json #2

Closed stevengeeky closed 6 years ago

stevengeeky commented 6 years ago

For #1 Showing number of fibers cleaned and number of resulting fibers

soichih commented 6 years ago

@kitchell Please review and merge this PR if it looks good. It adds a graph like this to the output.

screen shot 2018-06-21 at 8 43 31 am
kitchell commented 6 years ago

Can i edit the files before merging? fg_classified needs to stay called fg_classified not fg_classified_clean for the output.mat file. when it is opened in matlab that name stays with it and other apps will be expecting fg_classified.