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brainlife / app-endpointMapGeneration

This app will generate endpoint maps for all tracts in an input classification structure. User can specify what sort of decay/smoothing algorithm can be used (or none) and whether the output is to be normalized (e.g. max density voxel in tract endpoint mask = 1).
MIT License
0 stars 2 forks source link

running into memory error #1

Closed bacaron closed 4 years ago

bacaron commented 4 years ago

I've run into a memory exceeded error using this function recently. Can we add some vmem?

DanNBullock commented 4 years ago

How many streamlines are in the input?

On Tue, Oct 13, 2020, 2:35 PM Brad Caron notifications@github.com wrote:

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I've run into a memory exceeded error using this function recently. Can we add some vmem?

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https://github.com/brainlife/app-endpointMapGeneration/pull/1 Commit Summary

  • running into memory error

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bacaron commented 4 years ago

3 million

soichih commented 4 years ago

I've increased it to 30g