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brainlife / app-ensembletracking

This App creates a large set of candidate streamlines using an ensemble of algorithms and parameter values. All outputs will be then combined into a single track.tck output.
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Show final track.tck fiber count #13

Closed soichih closed 6 years ago

soichih commented 6 years ago

It would be nice if this app showed the final fiber count for track.tck somewhere (maybe in product.json?) It can also show counts from various algorithm before aggregated into track.tck.

bcmcpher commented 6 years ago

I have it checking the final count now and failing if it does not match the expected output number. Grabbing into products.json would be easy.

The counts of the individual parameters would be nice, but it'd be more work and with the global count check in place I'm not sure how necessary it is.

How would I add count to products.json?

On Mon, Apr 2, 2018 at 8:55 PM, Soichi Hayashi notifications@github.com wrote:

It would be nice if this app showed the final fiber count for track.tck somewhere (maybe in product.json?) It can also show counts from various algorithm before aggregated into track.tck.

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soichih commented 6 years ago

You can just dump any data to product.json (used to be products.json), and it will be picked up by Amaretti and displayed in UI - as raw JSON (maybe we can come up with some standard so that we can display them in nice charts / graphs, etc.. eventually)

bcmcpher commented 6 years ago

Alright. The app succeeded finally, so it's ready to merge. If you're around tomorrow I can check with you and add the count output when it merges.

On Tue, Apr 3, 2018 at 3:23 PM, Soichi Hayashi notifications@github.com wrote:

You can just dump any data to product.json (used to be products.json), and it will be picked up by Amaretti and displayed in UI - as raw JSON (maybe we can come up with some standard so that we can display them in nice charts / graphs, etc.. eventually)

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