brainlife / ezbids

A web service for semi-automated conversion of raw imaging data to BIDS
https://brainlife.io/ezbids
MIT License
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[ENH] Redeploy PET support with --skim option #122

Closed dlevitas closed 6 months ago

dlevitas commented 6 months ago

Before, pet2bids needed to check each file to assess whether the files were PET or not (via is_pet). This PR updates the pet2bids version, which includes a --skim option to speed up this process, as it otherwise creates a bottleneck in the ezBIDS workflow, specifically, at find_img_data.py