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break-through-cancer / btc-spatial-pipelines

Nextflow spatial pipelines (for Spatial Transcriptomics, IMC, etc.)
MIT License
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downsize TRANSCRIPTIONAL_PROGRAMS #29

Open dimalvovs opened 2 months ago

dimalvovs commented 2 months ago 
==== Report for jobs that Use Less Memory than Requested ====
     mem_req     mem_used   mem_wasted partition    job_id       job_name            
-------------------------------------------------------------------------------------
   128.00 GB      2.33 GB    125.67 GB shared       9691964      nf-BTC_SPATIAL_SPATIAL_BAYESTME_SPATIAL_TRANSCRIPTIONAL_PROGRAMS_(Visium_Human_Breast_Cancer-2)
   128.00 GB      2.24 GB    125.76 GB shared       9691975      nf-BTC_SPATIAL_SPATIAL_BAYESTME_SPATIAL_TRANSCRIPTIONAL_PROGRAMS_(Visium_Human_Breast_Cancer-1)
Total 2 jobs finished on 2024-09-18
Total RAM Reqested: 256.00 GB|Total RAM Used: 4.57 GB|Total RAM Wasted: 251.43 GB
RAM Efficiency: 1.79% of 256.00 GB
Please make your RAM request fit your job's actual needs so you don't waste RAM.
dimalvovs commented 4 days ago

@jeffquinn-msk does that look credible the transcriptional programs need only ~2.5G RAM?