brendanofallon / jovian

Detecting variants in NGS short read data by sequence-to-sequence modeling
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Add fraction to augment #23

Closed abolia closed 2 years ago

abolia commented 2 years ago

This PR adds an option to select which data augmentation step you want to run. It also adds a fraction to augment i.e. how much data you want to augment. Right now there is only one % that works for all the data augmentation steps, but could be changed eventually. For moving all the stuff to config, I think I can open a new PR for that since there are many more options other than these few that could be moved to config. So, I will have a new PBI for that.