Added a --nome option to tabulate to support NOMe-seq data ie to call CpG vs GpC methylation

brentp / bwa-meth

fast and accurate alignment of BS-Seq reads using bwa-mem and a 3-letter genome

https://arxiv.org/abs/1401.1129

MIT License

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Closed astatham closed 9 years ago

brentp commented 9 years ago

I don't have any nome data to test, but this looks reasonable and a very useful addition. @astatham do you have a small example set of nome-seq data?