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brentp / peddy

genotype :: ped correspondence check, ancestry check, sex check. directly, quickly on VCF
MIT License
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Explicitly enter duplicates in pedigree. #55

Open OgnjenMilicevic opened 5 years ago

OgnjenMilicevic commented 5 years ago

What happens if we have intentional proband duplicates? Is there a way to specify relatedness=1, or duplicates in the pedigree files?

brentp commented 5 years ago

there is no way to specify this, but you should just see those samples as having relatedness of 1 in the output.