brentp / slivar

genetic variant expressions, annotation, and filtering for great good.
MIT License
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DP threshold for chrX for males #147

Closed williamrowell closed 1 year ago

williamrowell commented 1 year ago

Similar to dropping the GQ threshold for chrX variants in males, do you think there should also be a lower AD threshold?

Related to https://github.com/PacificBiosciences/pb-human-wgs-workflow-snakemake/issues/127#issuecomment-1320413341