Open adigenova opened 1 year ago
Hi Alex, that is possible, but you'd have to do some coding yourself. You can see how to parse the somalier files in python here: https://github.com/brentp/somalier/blob/master/scripts/ancestry-predict.py
You could modify that to then output a simple VCF.
Cool, thanks!
Dear @brentp,
thanks for the awesome tool. I'm just wondering if there is a way to convert *.somalier file to VCF/PED for performing additional analysis?
Thanks in advance,
Best regards,
Alex