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brentp / somalier

fast sample-swap and relatedness checks on BAMs/CRAMs/VCFs/GVCFs... "like damn that is one smart wine guy"
MIT License
255 stars 35 forks source link

new tool fam-finder #19

Closed brentp closed 5 years ago

brentp commented 5 years ago

create a new tool to create a ped/fam file from *.somalier. it will only find first degree relationships, but this is often useful when there is no pedigree file for a cohort.