brentp / vcfanno

annotate a VCF with other VCFs/BEDs/tabixed files
https://genomebiology.biomedcentral.com/articles/10.1186/s13059-016-0973-5
MIT License
367 stars 56 forks source link

allow non-standard file names #81

Open brentp opened 6 years ago

brentp commented 6 years ago

see: https://groups.google.com/forum/#!topic/vcfanno/at_mnICTk2M

vcfanno (via brentp/bix) simply looks at the file name to determine the type-- VCF/BED/ etc.

This is a bad solution and should be improved.

brentp commented 5 years ago

bgz is now supported.