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brettc / partitionfinder

PartitionFinder discovers optimal partitioning schemes for DNA sequences.
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min subset size #93

Closed roblanf closed 8 years ago

roblanf commented 8 years ago

Also from Andrew Magee:

under the default PartitionFinder settings, the min-subset-size is not enforced to be 100 as it says in the manual. I have seen kmeans produce subsets of size 1,2, and 3 on real data.

Presumably this is an issue with the default setting being wrong. But it could be something more annoying...

roblanf commented 8 years ago

fixed here

https://github.com/brettc/partitionfinder/commit/51ce4c6f114db2df3d92b5161f4d50fb2746b729