Please fill out the issue checklist below, and provide all of the requested information.
Please always follow these steps:
[ x] Confirmed this is a problem with brew installing one, specific formula and not every time you run brew? If it's a general brew problem please file this issue at https://github.com/Homebrew/brew/issues/new.
[ x] Ran brew update and retried your prior step?
[ x] Ran brew doctor, fixed all issues and retried your prior step?
[ x] Ran brew gist-logs <formula> (where <formula> is the name of the formula that failed) and included the output link?
[ x] If brew gist-logs didn't work: ran brew config and brew doctor and included their output with your issue?
What happened (include command output)
The command (brew install brewsci/bio/kat) terminates unexpectedly and gives the following error message:
==> Installing kat from brewsci/bio
==> Installing dependencies for brewsci/bio/kat: brewsci/bio/matplotlib, pybind11, python@3.11 and scipy
==> Installing brewsci/bio/kat dependency: brewsci/bio/matplotlib
==> /opt/homebrew/opt/python@3.9/bin/python3 -c import setuptools... --no-user-c
Last 15 lines from /Users/Ross/Library/Logs/Homebrew/matplotlib/01.python3:
Please fill out the issue checklist below, and provide all of the requested information.
Please always follow these steps:
brew installing one, specific formula and not every time you runbrew? If it's a generalbrewproblem please file this issue at https://github.com/Homebrew/brew/issues/new.brew updateand retried your prior step?brew doctor, fixed all issues and retried your prior step?brew gist-logs <formula>(where<formula>is the name of the formula that failed) and included the output link?brew gist-logsdidn't work: ranbrew configandbrew doctorand included their output with your issue?To help us debug your issue please explain:
/opt/homebrew/opt/python@3.9/bin/python3 -c import setuptools, tokenize file = 'setup.py' exec(compile(getattr(tokenize, 'open', open)(file).read() .replace('\r\n', '\n'), file, 'exec')) --no-user-cfg install --prefix=/opt/homebrew/Cellar/matplotlib/3.3.4 --install-scripts=/opt/homebrew/Cellar/matplotlib/3.3.4/bin --install-lib=/opt/homebrew/Cellar/matplotlib/3.3.4/lib/python3.9/site-packages --single-version-externally-managed --record=installed.txt
If reporting this issue please do so at (not Homebrew/brew or Homebrew/homebrew-core): https://github.com/brewsci/homebrew-bio/issues
These open issues may also help: matplotlib 3.5.1 https://github.com/brewsci/homebrew-bio/pull/1497
brew installcommands) % brew config HOMEBREW_VERSION: 4.0.17 ORIGIN: https://github.com/Homebrew/brew HEAD: c0f8068573bbf886fdc78d3f9daca54d53e7e49e Last commit: 2 days ago Core tap JSON: 09 May 20:23 UTC HOMEBREW_PREFIX: /opt/homebrew HOMEBREW_CASK_OPTS: [] HOMEBREW_MAKE_JOBS: 12 Homebrew Ruby: 2.6.10 => /System/Library/Frameworks/Ruby.framework/Versions/2.6/usr/bin/ruby CPU: dodeca-core 64-bit arm_blizzard_avalanche Clang: 14.0.3 build 1403 Git: 2.39.2 => /Library/Developer/CommandLineTools/usr/bin/git Curl: 7.87.0 => /usr/bin/curl macOS: 13.3.1-arm64 CLT: 14.3.0.0.1.1679647830 Xcode: N/A Rosetta 2: false % brew doctor Your system is ready to brew.Formula additions or changes
To get formulae added or changed in Brewsci/bio please file a Pull Request.