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brewsci / homebrew-bio

:beer::microscope: Bioinformatics formulae for the Homebrew package manager (macOS and Linux)
http://brewsci.github.io/homebrew-bio
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Error on brew install brewsci/bio/staden-io-lib #1664

Closed nekoqdesu closed 3 months ago

nekoqdesu commented 4 months ago

Dear all,

I tried to install iqtree from homebrew and I get the following error message:

% brew install brewsci/bio/staden-io-lib ==> Fetching brewsci/bio/staden-io-lib ==> Downloading https://github.com/jkbonfield/io_lib/releases/download/io_lib-1- Already downloaded: /Users/minodaayumi/Library/Caches/Homebrew/downloads/3c0118a140a3d7f227b457b51b24ff3c57dce85253d0eb7f1346eeb3aa6ed443--io_lib-1.14.13.tar.gz ==> Installing staden-io-lib from brewsci/bio ==> ./configure --disable-silent-rules ==> make install Error: inreplace failed /opt/homebrew/Cellar/staden-io-lib/1.14.13/share/staden-io-lib/tests/Makefile: expected replacement of "/opt/homebrew/Library/Homebrew/shims/mac/super/" with "/usr/bin/"

YoshitakaMo commented 4 months ago

This issue occurred on Apple Silicon Mac. I've fixed this issue and updated to version 1.15.0. Please try brew update && brew install staden-io-lib.

nekoqdesu commented 4 months ago

Thank you!