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brian-cleary / LatentStrainAnalysis

Partitioning and analysis methods for large, complex sequence datasets
MIT License
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LSFScripts/SplitInput_ArrayJob.q missing #1

Closed fmaguire closed 8 years ago

fmaguire commented 8 years ago

Doesn't appear to be included in the repository so setupDirs.py is throwing an error, is this meant to be generated using create_jobs.py?

brian-cleary commented 8 years ago

setupDirs.py should be creating this file, so it doesn't need to be included.

See line 41: f = open('LSFScripts/SplitInput_ArrayJob.q','w')

Maybe you're working in another directory, and so LSFScripts doesn't exist?

On Wed, Sep 23, 2015 at 8:00 AM, Finlay Maguire notifications@github.com wrote:

Doesn't appear to be included in the repository so setupDirs.py is throwing an error, is this meant to be generated using create_jobs.py?

— Reply to this email directly or view it on GitHub https://github.com/brian-cleary/LatentStrainAnalysis/issues/1.

fmaguire commented 8 years ago

Ah yeah, sorry was being stupid with relpaths. Thanks.