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brian-team
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brian2modelfitting
Model fitting toolbox for the Brian 2 simulator
https://brian2modelfitting.readthedocs.io
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Fix efel units
#76
mstimberg
closed
10 months ago
0
Update build infrastructure and import/dependencies
#75
mstimberg
closed
11 months ago
0
Issue with Multi-run of Hodgkin-Huxley Example
#74
michmgee
opened
11 months ago
3
Make dependencies like sbi optional
#73
mstimberg
closed
11 months ago
0
Improve the simulation-based inference model
#72
bdevans
opened
1 year ago
0
Implement multi-objective optimisation
#71
bdevans
opened
1 year ago
0
Enable the user to define features for model fitting
#70
bdevans
opened
1 year ago
0
Compare model fitting algorithms
#69
bdevans
opened
1 year ago
0
Update nevergrad version
#68
mstimberg
closed
2 years ago
1
dummy pull request to debug efel issues
#67
mstimberg
closed
2 years ago
0
Remove lmfit
#66
mstimberg
closed
2 years ago
1
Fix handling of multiple variables with differing t_start/t_weights in refine
#65
mstimberg
closed
2 years ago
3
GSoC 2021: Support of the simulation-based inference with the model fitting toolbox
#64
akapet00
closed
2 years ago
2
Update tests
#63
akapet00
closed
3 years ago
0
Enable GPU support
#62
akapet00
closed
3 years ago
0
enable gpu support
#61
akapet00
closed
3 years ago
1
Add spike support
#60
akapet00
closed
3 years ago
1
Multiple output var support
#59
akapet00
closed
3 years ago
1
Enhance posterior viz
#58
akapet00
closed
3 years ago
1
Refactor `Inferencer`/`Fitter`
#57
mstimberg
opened
3 years ago
0
Add documentation for sbi
#56
mstimberg
closed
3 years ago
0
Add tests for sbi
#55
mstimberg
closed
3 years ago
0
Support spikes in sbi
#54
mstimberg
closed
3 years ago
0
Support multiple output variables for sbi
#53
mstimberg
closed
3 years ago
0
Add store load functionality
#52
akapet00
closed
3 years ago
0
Inestigate additional visualization techniques of parameter space
#51
akapet00
closed
3 years ago
0
Enable all inference methods included in `sbi`
#50
akapet00
closed
3 years ago
2
Add sbi wrapper class
#49
akapet00
closed
3 years ago
5
Generalize `FeatureMetric`
#48
mstimberg
opened
3 years ago
1
Split up simulations if necessary
#47
mstimberg
closed
3 years ago
2
Store simulation/training results
#46
mstimberg
closed
3 years ago
4
Investigate using dimensionality-reduction methods on outputs
#45
mstimberg
closed
3 years ago
7
Create class to wrap first stages of sbi
#44
mstimberg
closed
3 years ago
1
Add an example to visualize the evolutuion of fitted parameters in bounded parameter space
#43
akapet00
opened
3 years ago
4
Fix: Fitter exception message #41
#42
eslam69
closed
3 years ago
7
Typo in the exception message at the assertion of optimizer's parent class
#41
eslam69
closed
3 years ago
1
Add DragonFly optimizer Example
#40
eslam69
opened
3 years ago
4
GSoC Example
#39
pb663
opened
3 years ago
0
Preliminary support for multi-objective optimization
#38
mstimberg
closed
3 years ago
15
Deal with minimal population sizes and budgets in Nevergrad
#37
mstimberg
closed
4 years ago
0
Support dynamical coupling models
#36
mstimberg
closed
4 years ago
3
nevegrad 'instrumentation' problem
#35
gvignoud
closed
2 years ago
2
[MRG] Fitter.generate for multiple variables
#34
mstimberg
closed
4 years ago
3
[MRG] provide access to target variable in model
#33
mstimberg
closed
4 years ago
1
Make Gamma factor calculation more consistent
#32
mstimberg
closed
4 years ago
0
[MRG] Temporal weighting
#31
mstimberg
closed
4 years ago
13
[WIP] Display/return quantities with units
#30
mstimberg
closed
4 years ago
3
[MRG] TraceFitter.refine with calculated gradient
#29
mstimberg
closed
4 years ago
0
[MRG] Add a refine function that uses lmfit.minimize
#28
mstimberg
closed
4 years ago
32
Bug with last merge
#27
romainbrette
closed
4 years ago
2
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