lesgourg
commented
3 years ago Dear @PhyPy-Dm , you typed -bf bestfit/base.bestfit instead of -b bestfit/base.bestfit :-)
Closed PhyPy-Dm closed 3 years ago
lesgourg
commented
3 years ago Dear @PhyPy-Dm , you typed -bf bestfit/base.bestfit instead of -b bestfit/base.bestfit :-)
PhyPy-Dm
commented
3 years ago @lesgourg when i typed -b bestfit/base.bestfit there's also errors as followed
`/!\ Defaulting to the 'run' command. Please update the call of MontePython. For more info, see the help string and/or the documentation Running Monte Python v3.4.0
with CLASS v3.0.1
Testing likelihoods for: ->Planck_highl, Planck_lowl, lowlike
Configuration Error:
/|\ Trying to import the Planck_highl likelihood as asked in the parameter
/o\ file, and failed. Please make sure it is in the montepython/likelihoods
folder, and is a proper python module. Check also that the name of the
class defined in the init.py matches the name of the folder. In case
this is not enough, here is the original message: No module named
'likelihoods.Planck_highl'
Traceback (most recent call last):
File "/home/hejiayin/MCMClass/montepython/montepython/data.py", line 474, in initialise_likelihoods
exec("from likelihoods.%s import %s" % (
File "
During handling of the above exception, another exception occurred:
Traceback (most recent call last): File "/home/hejiayin/MCMClass/montepython/montepython/run.py", line 191, in safe_initialisation cosmo, data, command_line, success = initialise(custom_command) File "/home/hejiayin/MCMClass/montepython/montepython/initialise.py", line 67, in initialise data = Data(command_line, path) File "/home/hejiayin/MCMClass/montepython/montepython/data.py", line 356, in init self.initialise_likelihoods(self.experiments) File "/home/hejiayin/MCMClass/montepython/montepython/data.py", line 477, in initialise_likelihoods raise io_mp.ConfigurationError( io_mp.ConfigurationError:
Configuration Error:
/|\ Trying to import the Planck_highl likelihood as asked in the parameter
/o\ file, and failed. Please make sure it is in the montepython/likelihoods
folder, and is a proper python module. Check also that the name of the
class defined in the init.py matches the name of the folder. In case
this is not enough, here is the original message: No module named
'likelihoods.Planck_highl'
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "montepython/MontePython.py", line 40, in
Configuration Error:
/|\ The initialisation was not successful, resulting in a potentially half
/o\ created log.param. Please see the above error message. If you run the
exact same command, it will not work. You should solve the problem, and
try again.
`
PhyPy-Dm
commented
3 years ago @lesgourg I check the source folder likelihoods of montepython and I didn't find the Planck_highl, Planck_lowl, and I didn't find them in brinckmann's source files on github either.
dchooper
commented
3 years ago Hi,
The base.param is a deprecated parameter file that is kept for historical reasons. We recommend instead using one of the base2015... or base2018... param files.
However, you are correct that in it's current implementation it does not run, as it references the likelihoods with the former naming convention (before the release of Planck 2018). We will update this in the forthcoming release such that this param file is operational again.
Please note also that it is good praxis to specifically pass the "run" command to MontePython (i.e. python montepython/MontePython.py run, instead of letting MontePython guess if you are running in run or info mode.
Best, Deanna
PhyPy-Dm
commented
3 years ago Dear @lesgourg when I modify my base.param to change Planck_highl, Planck_lowl to Planck15_highl, Planck15_lowl, which exsit in likelihoods folder, but i get errors again
**/!\ Defaulting to the 'run' command. Please update the call of MontePython. For more info, see the help string and/or the documentation Running Monte Python v3.4.0
with CLASS v3.0.1 /!\ Detecting empty folder, logging the parameter file
Testing likelihoods for: ->Planck15_highl, Planck15_lowl, lowlike
Traceback (most recent call last): File "/home/hejiayin/MCMClass/montepython/montepython/likelihood_class.py", line 892, in init self.clik = clik.clik(self.path_clik) File "lkl.pyx", line 72, in clik.lkl.clik.init clik.lkl.CError: <exception str() failed>
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "montepython/MontePython.py", line 40, in
Likelihood Error: /|\ The path to the .clik file for the likelihood Planck15_highl was not /o\ found where indicated: /home/hejiayin/MCMClass/code/plc_3.0/plc-3.01/../plc_2.0/hi_l/plik/plik_d x11dr2_HM_v18_TT.clik Note that the default path to search for it is one directory above the path['clik'] field. You can change this behaviour in all the Planck_something.data, to reflect your local configuration, or alternatively, move your .clik files to this place. **
PhyPy-Dm
commented
3 years ago @lesgourg @dchooper Thank you so much, now I know how to solve this problem.
Best, PhyPy-Dm
msabogal
commented
1 year ago Dear @PhyPy-Dm
How did you solve that problem with the Planck15_highl?
Best, Miguel
Hi all： what's wrong with my montepython when I run " python montepython/MontePython.py -o planck/ -p input/base.param -c covmat/base.covmat -bf bestfit/base.bestfit --conf my.conf " and getting the follwing errors, how can I fix it?
/!\ Defaulting to the 'run' command. Please update the call of MontePython. For more info, see the help string and/or the documentation
Configuration Error: /|\ argument -b/--bestfit: The file 'f' does not exist
Traceback (most recent call last): File "/home/hejiayin/anaconda3/lib/python3.8/argparse.py", line 2422, in _get_value result = type_func(arg_string) File "/home/hejiayin/MCMClass/montepython/montepython/parser_mp.py", line 120, in existing_file raise ap.ArgumentTypeError(msg) argparse.ArgumentTypeError: The file 'f' does not exist
During handling of the above exception, another exception occurred:
Traceback (most recent call last): File "/home/hejiayin/anaconda3/lib/python3.8/argparse.py", line 1800, in parse_known_args namespace, args = self._parse_known_args(args, namespace) File "/home/hejiayin/anaconda3/lib/python3.8/argparse.py", line 2006, in _parse_known_args start_index = consume_optional(start_index) File "/home/hejiayin/anaconda3/lib/python3.8/argparse.py", line 1946, in consume_optional take_action(action, args, option_string) File "/home/hejiayin/anaconda3/lib/python3.8/argparse.py", line 1858, in take_action argument_values = self._get_values(action, argument_strings) File "/home/hejiayin/anaconda3/lib/python3.8/argparse.py", line 2389, in _get_values value = self._get_value(action, arg_string) File "/home/hejiayin/anaconda3/lib/python3.8/argparse.py", line 2428, in _get_value raise ArgumentError(action, msg) argparse.ArgumentError: argument -b/--bestfit: The file 'f' does not exist
During handling of the above exception, another exception occurred:
Traceback (most recent call last): File "/home/hejiayin/MCMClass/montepython/montepython/run.py", line 191, in safe_initialisation cosmo, data, command_line, success = initialise(custom_command) File "/home/hejiayin/MCMClass/montepython/montepython/initialise.py", line 31, in initialise command_line = parser_mp.parse(custom_command) File "/home/hejiayin/MCMClass/montepython/montepython/parser_mp.py", line 1053, in parse args = parser.safe_parse_args() File "/home/hejiayin/MCMClass/montepython/montepython/parser_mp.py", line 47, in safe_parse_args return self.parse_args(args) File "/home/hejiayin/anaconda3/lib/python3.8/argparse.py", line 1768, in parse_args args, argv = self.parse_known_args(args, namespace) File "/home/hejiayin/anaconda3/lib/python3.8/argparse.py", line 1800, in parse_known_args namespace, args = self._parse_known_args(args, namespace) File "/home/hejiayin/anaconda3/lib/python3.8/argparse.py", line 1988, in _parse_known_args positionals_end_index = consume_positionals(start_index) File "/home/hejiayin/anaconda3/lib/python3.8/argparse.py", line 1965, in consume_positionals take_action(action, args) File "/home/hejiayin/anaconda3/lib/python3.8/argparse.py", line 1874, in take_action action(self, namespace, argument_values, option_string) File "/home/hejiayin/anaconda3/lib/python3.8/argparse.py", line 1159, in call subnamespace, arg_strings = parser.parse_known_args(arg_strings, None) File "/home/hejiayin/anaconda3/lib/python3.8/argparse.py", line 1807, in parse_known_args self.error(str(err)) File "/home/hejiayin/MCMClass/montepython/montepython/parser_mp.py", line 37, in error raise io_mp.ConfigurationError(message) io_mp.ConfigurationError:
Configuration Error: /|\ argument -b/--bestfit: The file 'f' does not exist
During handling of the above exception, another exception occurred:
Traceback (most recent call last): File "montepython/MontePython.py", line 40, in
sys.exit(run())
File "/home/hejiayin/MCMClass/montepython/montepython/run.py", line 31, in run
cosmo, data, command_line, success = safe_initialisation(
File "/home/hejiayin/MCMClass/montepython/montepython/run.py", line 197, in safe_initialisation
raise io_mp.ConfigurationError(
io_mp.ConfigurationError:
Configuration Error: /|\ The initialisation was not successful, resulting in a potentially half /o\ created
log.param. Please see the above error message. If you run the exact same command, it will not work. You should solve the problem, and try again.