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brisvag
/
blik
Python tool for visualising and interacting with cryo-ET and subtomogram averaging data.
https://brisvag.github.io/blik/
GNU General Public License v3.0
23
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8
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Add simple widget for rotating particles
#181
brisvag
closed
4 weeks ago
0
update readme with sphere and TODO in docs
#180
brisvag
closed
1 month ago
0
Sphere/vescicle picking
#179
brisvag
closed
1 month ago
0
Update tutorial
#178
brisvag
opened
1 month ago
0
Temp fix for napari bug, add test to catch it
#177
brisvag
closed
1 month ago
0
add sample data using HIV dataset
#176
brisvag
closed
1 month ago
0
Add units and axis labels
#175
brisvag
closed
1 month ago
0
use contributable menus from napari 0.5.0
#174
brisvag
closed
1 month ago
0
I can't open a simple star
#173
kimdn
closed
1 month ago
1
fix test warnings
#172
brisvag
closed
2 months ago
0
Add ability to use a volumetric segmentation to create surfaces
#171
brisvag
closed
1 month ago
0
gaussian filter has no "Run" button
#170
dmichalak
closed
3 months ago
2
install error using Napari GUI
#169
JoeBeton
closed
1 month ago
7
ci(dependabot): bump peaceiris/actions-gh-pages from 3 to 4
#168
dependabot[bot]
closed
4 months ago
0
remove edge_width for points layer
#167
McHaillet
closed
4 months ago
9
ci(dependabot): bump softprops/action-gh-release from 1 to 2
#166
dependabot[bot]
closed
5 months ago
0
colouring points by data attribute
#165
McHaillet
closed
1 month ago
4
out of slice fading of point and orientation layer
#164
McHaillet
closed
1 month ago
2
ci(dependabot): bump codecov/codecov-action from 3 to 4
#163
dependabot[bot]
closed
7 months ago
0
Fix particle layers clashing when created by different tools
#162
brisvag
closed
7 months ago
0
Fix interpolation and spline issues
#161
brisvag
closed
7 months ago
1
allow writing tbl files
#160
brisvag
closed
7 months ago
1
Fix failing docs deploy
#159
brisvag
closed
7 months ago
1
Added .rec extensions to whitelist
#158
rdrighetto
closed
7 months ago
3
Suggestion: show tomograms in the same orientation as IMOD
#157
rdrighetto
opened
8 months ago
3
Minor issue: expected MRC file extension
#156
rdrighetto
closed
7 months ago
1
ci(dependabot): bump actions/setup-python from 4 to 5
#155
dependabot[bot]
closed
8 months ago
1
ci(dependabot): bump aganders3/headless-gui from 1 to 2
#154
dependabot[bot]
closed
8 months ago
1
Generating the same particle twice overrides the existing layer but with broken orientations
#153
brisvag
opened
11 months ago
2
ci(dependabot): bump actions/checkout from 3 to 4
#152
dependabot[bot]
closed
11 months ago
1
Some leftover issues
#151
brisvag
closed
12 months ago
0
Fix orientations defaults and related IO
#150
brisvag
closed
12 months ago
1
use self-dependency for extras
#149
brisvag
closed
1 year ago
0
Readd CI and fix issues
#148
brisvag
closed
1 year ago
0
switch to pyrepo and change build system
#147
brisvag
closed
1 year ago
0
Changed repo ownership
#146
brisvag
closed
1 year ago
0
Some readme changes
#145
brisvag
closed
1 year ago
0
Use new poseset model
#144
brisvag
closed
1 year ago
1
reducing coordinate opacity makes black dots on the image layer
#143
McHaillet
opened
1 year ago
12
issue with star file reading?
#142
McHaillet
closed
1 year ago
7
saving star file does not save pixel size correctly
#141
brisvag
closed
1 year ago
1
saving files should add extension if needed
#140
brisvag
closed
1 month ago
0
Surface picking
#139
brisvag
closed
1 year ago
1
Add hdf reader
#138
brisvag
closed
1 year ago
0
Simple particle picker
#137
brisvag
closed
1 year ago
1
fix vector generation
#136
brisvag
closed
1 year ago
1
ci(dependabot): bump actions/setup-python from 2 to 4
#135
dependabot[bot]
closed
1 year ago
0
ci(dependabot): bump codecov/codecov-action from 2 to 3
#134
dependabot[bot]
closed
1 year ago
0
Small changes for napari 0.4.17
#133
brisvag
closed
1 year ago
1
Update to using cryotypes and cryohub and new machinery.
#132
brisvag
closed
1 year ago
1
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