brleeflang / eurocarb

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contribute_structure_seq.action - database schema (seq) #38

Closed GoogleCodeExporter closed 9 years ago

GoogleCodeExporter commented 9 years ago
I have tried looking at the ms flow and get an error after creating sequence 
(contribute_structure_seq.action).

Error:
insert into seq.glycan_residue (linkage_child, linkage_parent, residue_name, 
left_index, right_index, 
glycan_sequence_id, parent_id, basetype_id, stereochem_id, anomer, 
conformation, superclass, 
residue_type, glycan_residue_id) values (NULL, NULL, D-GalNAc, 1, 6, 13713, 
NULL, 1938, 25, , 
NULL, 6, 'm', 117500)

My current table lacks most of these columns and the create_seq.sql does not 
include most of these 
columns either?

Original issue reported on code.google.com by matthew....@gmail.com on 18 Jul 2009 at 1:27

GoogleCodeExporter commented 9 years ago
problem found and corrected - manual update to seq.glycan_residue table required

Original comment by matthew....@gmail.com on 18 Jul 2009 at 1:50

GoogleCodeExporter commented 9 years ago

Original comment by glycosl...@googlemail.com on 20 Jul 2009 at 12:10