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broadinstitute
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2023_12_JUMP_data_only_vignettes
Collection of JUMP documentation and projects for internal and public consumption
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chore(deps-dev): bump zipp from 3.17.0 to 3.19.1 in /bak
#41
dependabot[bot]
closed
1 week ago
1
chore(deps): bump certifi from 2023.11.17 to 2024.7.4 in /bak
#40
dependabot[bot]
closed
1 week ago
1
remove orf image notebook
#39
jessica-ewald
closed
3 weeks ago
1
add notebook for displaying orf images
#38
jessica-ewald
closed
1 month ago
1
Explore vignettes
#37
niranjchandrasekaran
opened
1 month ago
1
build(deps): bump scikit-learn from 1.4.0 to 1.5.0 in /bak
#36
dependabot[bot]
closed
1 week ago
1
build(deps): bump urllib3 from 2.1.0 to 2.2.2 in /bak
#35
dependabot[bot]
closed
1 week ago
1
build(deps): bump tornado from 6.4 to 6.4.1 in /bak
#34
dependabot[bot]
closed
1 week ago
1
build(deps): bump requests from 2.31.0 to 2.32.0 in /bak
#33
dependabot[bot]
closed
1 week ago
1
build(deps): bump jinja2 from 3.1.3 to 3.1.4 in /bak
#32
dependabot[bot]
closed
1 week ago
1
build(deps-dev): bump jinja2 from 3.1.3 to 3.1.4
#31
dependabot[bot]
closed
1 week ago
1
build(deps): bump tqdm from 4.66.1 to 4.66.3 in /bak
#30
dependabot[bot]
closed
1 week ago
1
Update tutorial_basic.py
#29
shntnu
closed
4 months ago
0
build(deps): bump aiohttp from 3.9.3 to 3.9.4
#28
dependabot[bot]
closed
4 months ago
1
build(deps): bump idna from 3.6 to 3.7 in /bak
#27
dependabot[bot]
closed
1 week ago
1
build(deps): bump idna from 3.6 to 3.7
#26
dependabot[bot]
closed
1 week ago
1
build(deps): bump pillow from 10.2.0 to 10.3.0
#25
dependabot[bot]
closed
1 week ago
1
build(deps): bump pillow from 10.2.0 to 10.3.0 in /bak
#24
dependabot[bot]
closed
1 week ago
1
build(deps): bump pyyaml from 5.3.1 to 5.4 in /bak
#23
dependabot[bot]
closed
5 months ago
0
FOXO3/TGFB short mention (CRISPR)
#22
afermg
opened
7 months ago
12
build(deps): bump pillow from 10.1.0 to 10.2.0
#21
dependabot[bot]
closed
5 months ago
1
Definition of ORF and CRISPR similarity clusters
#20
auranic
closed
4 months ago
1
build(deps): bump jupyterlab from 4.0.9 to 4.0.11
#19
dependabot[bot]
closed
5 months ago
1
build(deps): bump notebook from 7.0.6 to 7.0.7
#18
dependabot[bot]
closed
5 months ago
1
POLRID, SPATA25 connected to many genes: exploration for MorphMap paper (ORF, but want to check CRISPR)
#17
AnneCarpenter
closed
1 month ago
7
Cluster ECH1, UQCRFS1, SARS2: exploration for MorphMap paper (ORF+CRISPR)
#16
AnneCarpenter
opened
7 months ago
11
Cluster GPR176, TSC22D1, DPAGT1, CHRM4: exploration for MorphMap paper (ORF+CRISPR)
#15
AnneCarpenter
opened
7 months ago
14
build(deps): bump jupyter-lsp from 2.2.1 to 2.2.2
#14
dependabot[bot]
closed
5 months ago
1
build(deps): bump jinja2 from 3.1.2 to 3.1.3
#13
dependabot[bot]
closed
5 months ago
1
ZBTB16 & SLC39A1: exploration for MorphMap paper
#12
AnneCarpenter
opened
8 months ago
18
Find Evotec gene connections to pursue: exploration for MorphMap paper Evotec; [ORFs only] OR [CRISPRs only]
#11
tjetkaARD
opened
8 months ago
10
YAP1 connections: exploration for MorphMap paper (ORF but need to check CRISPR)
#10
AnneCarpenter
opened
8 months ago
39
RAB30-NAT14: exploration of Evotec for MorphMap paper
#9
AnneCarpenter
closed
1 month ago
33
Find Ardigen gene connections to pursue: exploration for MorphMap paper
#8
AnneCarpenter
closed
7 months ago
6
Find gene connections [ORF+CRISPR both] to pursue: exploration for MorphMap paper
#7
AnneCarpenter
opened
9 months ago
24
SLC or OR gene superfamilies: exploration for MorphMap paper (ORFs, need to check CRISPR)
#6
AnneCarpenter
opened
9 months ago
13
HOOK2 opposite effect than PAFAH1B1, NDE1, NDEL1: exploration for MorphMap paper (ORF)
#5
AnneCarpenter
opened
9 months ago
24
RAB40B has the opposite phenotypes of PIK3R3/INSYN1: exploration for MorphMap paper (ORF)
#4
AnneCarpenter
closed
3 weeks ago
62
MYT1-RNF41 exploration for MorphMap paper (ORF)
#3
afermg
opened
9 months ago
20
build(deps): bump jupyter-server from 2.11.1 to 2.11.2
#2
dependabot[bot]
closed
9 months ago
1
build(deps): bump pyyaml from 5.3.1 to 5.4
#1
dependabot[bot]
closed
5 months ago
1