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broadinstitute / ABC-Enhancer-Gene-Prediction

Cell type specific enhancer-gene predictions using ABC model (Fulco, Nasser et al, Nature Genetics 2019)
MIT License
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Input file #215

Closed shenlinyong closed 4 months ago

shenlinyong commented 4 months ago

Hello! Your software is really great, but I only have ATAC-Seq, Hi-C data, but no H3K27ac ChIP-Seq data. Can I use this ABC model for enhancer-gene prediction.

atancoder commented 4 months ago

Yes, that is sufficient to use ABC