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broadinstitute / CellBender

CellBender is a software package for eliminating technical artifacts from high-throughput single-cell RNA sequencing (scRNA-seq) data.
https://cellbender.rtfd.io
BSD 3-Clause "New" or "Revised" License
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Background Fraction #369

Open hk2rma opened 1 week ago

hk2rma commented 1 week ago

How to interpret the background fraction column included in the metadata, Does a value of 0.5 mean that 50% of the contents of that cell are ambient RNA? I couldn't find any documentation on this and a HTML file was not generated.

Thanks