Closed mxposed closed 3 years ago
Sorry, had fixed torch 1.7 but new pyro 1.6. Fixed by downgrading pyro
Hey @mxposed, just in case you still have it, would you be able to share a yaml file for your conda env? I'm having trouble installing CellBender, and a list of package versions from a environment that works would be great 😅
Thanks! Will
Sorry @wmacnair I don't use conda
Ok, thanks. I managed to get it to work in the end, by actually following the installation instructions and not trying to use a colleague's environment...
Hello,
I'm installing cellbender like this:
pip install git+https://github.com/broadinstitute/CellBender.git@v0.2.0#egg=CellBender
It installs successfully, however doesn't work afterward:
Maybe I need to fix
pyro
ortorch
dependency to some particular version?