Open asmirnov239 opened 4 years ago
@JMF47 is this done? If so, can we put the blacklist in the appropriate bucket and document here?
Do we also need to separate out another FilterIntervals step for ploidy determination in the official WDL? I think this is done in the SV WGS WDLs, so perhaps merging those changes will close this issue.
This is needed for improving sex genotyping performance