ModuleNotFoundError: No module named 'Sample'

[vicentepp]

Hello, I just cloned PhylogicNDT repostitory and I am trying to run it and I get the following error when running: './PhylogicNDT.py Cluster -i Patient_ID -s Sample1_id:Sample1_maf:Sample1_CN_seg:Sample1_Purity:Sample1_Timepoint -s Sample2_id:Sample2_maf:Sample2_CN_seg:Sample2_Purity:Sample2_Timepoint ... SampleN_info ' C:\Users\Vicente\python\Phylogic\PhylogicNDT\phylogicndt.log

ModuleNotFoundError Traceback (most recent call last) ~\python\Phylogic\PhylogicNDT\PhylogicNDT.py in 28 import BuildTree.CellPopulation 29 import GrowthKinetics.GrowthKinetics ---> 30 import SinglePatientTiming.SinglePatientTiming 31 import LeagueModel.LeagueModel 32

~\python\Phylogic\PhylogicNDT\SinglePatientTiming\SinglePatientTiming.py in 2 import numpy as np 3 import itertools ----> 4 from data.Patient import Patient 5 import TimingEngine 6 from output.PhylogicOutput import PhylogicOutput

~\python\Phylogic\PhylogicNDT\data\Patient.py in 2 # Patient - central class to handle and store sample CCF data 3 ########################################################## ----> 4 from Sample import TumorSample 5 from Sample import RNASample 6 from SomaticEvents import SomMutation, CopyNumberEvent

ModuleNotFoundError: No module named 'Sample'

How can I solve this? I am pretty new to Python, so I would appreciate any help. I am using Jupyter to run this. Thanks!

[THT-sleepy]

Hello there,

Could you please tell how did you solve the problem at last? I have met the same problem and I have no idea on solving it.

Best Huatao