broadinstitute / PhylogicNDT

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Docker build fails #63

Open emsisson opened 1 year ago

emsisson commented 1 year ago

Greetings,

I have been unable to build the Docker container on a RHEL 7 server with "Docker version 20.10.7, build f0df350" and on a Macintosh with "Docker version 20.10.11, build dea9396". I see the following messages (from RHEL 7):

$ docker build --tag phylogicndt . -- ''messages:'' Sending build context to Docker daemon 4.559MB Step 1/26 : from bitnami/minideb latest: Pulling from bitnami/minideb f8c1c832ce65: Pull complete Digest: sha256:113aec70ae64fcf8752e70f07fca47652fad1cc5d0e252313d67fcfb0ac112aa Status: Downloaded newer image for bitnami/minideb:latest ---> 1e6d839039bd Step 2/26 : RUN install_packages python-pip build-essential python-dev r-base r-base-dev git graphviz python-tk ---> Running in ac75ee173510 Reading package lists... Building dependency tree... Package python-pip is not available, but is referred to by another package. This may mean that the package is missing, has been obsoleted, or is only available from another source However the following packages replace it: python3-pip

   E: Package 'python-pip' has no installation candidate
   apt failed, retrying
   Reading package lists...
   Building dependency tree...
   Package python-pip is not available, but is referred to by another package.
   This may mean that the package is missing, has been obsoleted, or
   is only available from another source
   However the following packages replace it:
     python3-pip

   E: Package 'python-pip' has no installation candidate
   apt failed, retrying
   Reading package lists...
   Building dependency tree...
   Package python-pip is not available, but is referred to by another package.
   This may mean that the package is missing, has been obsoleted, or
   is only available from another source
   However the following packages replace it:
     python3-pip

   E: Package 'python-pip' has no installation candidate
   The command '/bin/sh -c install_packages python-pip build-essential python-dev r-base r-base-dev git graphviz python-tk' returned a non-zero code: 100

Please tell me how to proceed.

Regards, Eric Sisson