broadinstitute / catch

A package for designing compact and comprehensive capture probe sets.
MIT License
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Add tools to pool probes across datasets #11

Closed haydenm closed 6 years ago

haydenm commented 6 years ago

When pooling probes across multiple datasets, we would like to find optimal parameters for each dataset subject to a constraint on the total number of probes in the pool.

This is heavily based on the script find_optimal_params.py in @haydenm's hybsel-design-runs repo.

Modules containing functions to search the space of parameters are in hybseldesign/pool/. The script to run these procedures is bin/pool_probes.py.